Transcript Information: S_Transcript_3528.p2


Annotated TAIR IDAT3G22110.1
Annotated Gene Name20S proteasome alpha subunit C1
Annotated Gene Symbol(s)PAC1
Annotation TypeOrtholog
Chromosome Positionchr3:7792819-7793571 | Reverse length=250
E-Value3.8E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 158.527397138724
Replicate 254.585626753851
Replicate 348.568320921354
Condition 2: 8 Hour
Replicate 176.210657826567
Replicate 270.948173375388
Replicate 380.25289237732
Condition 3: 24 Hour
Replicate 151.696656547462
Replicate 253.183207244895
Replicate 358.08104249465


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3528.p2 GENE.S_Transcript_3528~~S_Transcript_3528.p2 ORF type:complete len:251 (+),score=54.04,Proteasome|PF00227.22|9.4e-62,Proteasome_A_N|PF10584.5|9.5e-14 S_Transcript_3528:129-881(+)
ATGTCTCGGAGGTATGATAGTCGCACGACGATCTTCTCCCCGGAAGGTCGACTCTACCAGGTAGAGTATGCCATGGAGGCTATTGGTAATGCTGGAAGTGCCATTGGGATTTTGGCAAAAGATGGGGTTGTATTGGTTGGTGAAAAGAAGGTCACTTTTAAGCTCCTTCAAACCTCCACCTCCACTGAGAAGATGTACAAGATCGATGATCATGTTGCGTGTGCTGTTGCTGGTATAATGTCTGATGCTAACATCCTTATCAACACAGCTAGGGTCCAGGCTCAGCGTTACACTTTCGCTTATCAAGAGCCAATGCCTGTCGAGCAGCTGGTTCAGTCTCTTTGTGATACCAAGCAAGGGTACACTCAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCCTTTCTGTTTGCTGGGTGGGATAAGAATTTCGGATTCCAGCTTTATATGAGTGACCCTAGTGGTAACTATGGTGGGTGGAAAGCGACTGCTATTGGAGCGAACAACCAAGCTGCACAATCTATGCTGAAGCAGGATTATAAGGATGATATCACTAGGGAAGATGCGGTCCAGCTTGCGTTGAAGGTTCTCAGTAAGACAATGGACAGCACCAGTCTTACTTCTGAGAAGCTTGAATTGGCCGAGGTTTACCAAATGCCTTCTGGGAAAGTTAAGTACCATGTGCACTCTCCGGATTCCTTGAACAAGTTGTTGGTTAAGTCTGGTCTCACTCAACCTGCTGCAGAAACCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3528.p2 GENE.S_Transcript_3528~~S_Transcript_3528.p2 ORF type:complete len:251 (+),score=54.04,Proteasome|PF00227.22|9.4e-62,Proteasome_A_N|PF10584.5|9.5e-14 S_Transcript_3528:129-881(+)
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTFKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDDITREDAVQLALKVLSKTMDSTSLTSEKLELAEVYQMPSGKVKYHVHSPDSLNKLLVKSGLTQPAAETS*

Click here to download the sequence:
Link to NCBI Protein BLAST