Transcript Information: S_Transcript_352822.p1


Annotated TAIR IDAT3G28640.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10731518-10733032 | Reverse length=504
E-Value1E-190
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1793815576284
Replicate 20.80769364468744
Replicate 30.53302705443932
Condition 2: 8 Hour
Replicate 11.6846647456695
Replicate 21.8535442996305
Replicate 32.7517568199109
Condition 3: 24 Hour
Replicate 10.42090334278601
Replicate 20.74235991675897
Replicate 30.58316865676569


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_352822.p1 GENE.S_Transcript_352822~~S_Transcript_352822.p1 ORF type:5prime_partial len:519 (+),score=80.96,PPR|PF01535.16|5.4e+03,PPR|PF01535.16|0.016,PPR|PF01535.16|0.1,PPR|PF01535.16|6.2e-07,PPR|PF01535.16|9.6e+02,PPR|PF01535.16|0.00068,PPR|PF01535.16|0.036,PPR|PF01535.16|1.2,PPR|PF01535.16|0.00088,PPR|PF01535.16|62,PPR|PF01535.16|4.4e+03,PPR_2|PF13041.2|0.00033,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|2.9e-10,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|6.1e+03,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|98,PPR_3|PF13812.2|0.81,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|23,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|4.5,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|38,PPR_1|PF12854.3|0.41,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|4e+02,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|2e+02,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|0.0048 S_Transcript_352822:2-1558(+)
TCTAATCTAATTACTCTGCCTCCCTTCATGAATGTTACATCCATCATCAACCCCAGAGCATGGCAACGCCTTATGACCCTCATCACCCGCTGCCAAAACATGCGCCAACTCAAACCAATTCATGCTCTCTTCATCACTCACGGCCTTGCCTTCAACACATTCGCCATTAGCAAACTCCTTGAGTTCACCGCCCTTTCTAATGGGGGCGACCTCTCTTATGCCCTGCTTCTCTTTCGCCATTTCCCATCACCCAATGCCTTCTTCTATAACACCCTCATTCGGTCATACTCAAAGAGCTCTTACCCGCATTTTTCTCTTCATTATTTTAACCTCATGTTGAAGGATACTAATGTTGTACCTGACCAGCATACTTTCCCTTTTGTTTTGATTGCTTGTGGTTATGGGTGTTGGGTTTCTGAGGGTAGAAAGGTTCACACCTTGTTGATGAAAAATGGGTTGGACTCAGATGTGTATATTCAGACTGCCCTCATAAGGTTTTATTGTAATTGTGGTGGTTTGGTGGATGCCCGTAAGGTGTTTGATGAAATTCCTCAACGAGATGTTGTTAAATGGAATGTGCTCATGAATGGGTATGTTAAAGGTGGGTTGGCTTCTGAGTGTTTGAGCTTGTTTAAGGATATGTTGGTGTCCGGTGTTGAGCCTGATGAGTTCTGTGTGACTACGGCAGTTAATGCTTGCGCGAAGATTGGGATTCTTTGTCAAGGGAAATGGATGCATGAGTATATTAAGAGGAGGGGCAATATGGTTTCGGATAGTATTGTCGGGACAGCGTTAGTAGATATGTATTCCAAGTGTGGTTGTGTCGATTTGGCTATAGAGGTTTTTGAGGGAATGCCAGAGAGGAATGTGGAATGTTGGGCAGCTTTCATTGGGGGCCTAGCTGTAAATGGGTATGCTAGGGAGGCGATAATGTGCTTGGACAGGATGCAGGAAGAGGATGGCTTAAGGCCTGATGGGGTTGCTCTACTTGGGGTTTTTTCGGCTTGTACACATGCAGGACAAGTAGAGGAAGGTTTACATTTGCTGGACAACATGGAAGCCAAGTATGGTGAAGCACCAAAGTATGAGCATTATAGTTGTGTGGTGGATATGTTGTGCAAGGCAGGGCGGTTGATTGAGGCACTTAACATCATTAGAAGAATGCCTATGAAACCACTTGCGTCTGTGTGGGGGGCATTATTGAGTGGTTGTCGAACACATAAGAATGTTGAGCTTGCCGAGCTTGCAGTTAGGGAGCTTGAGTTGTTAGGAGAAGGAAGAGTAGAAGATGGCATATATGTCGAACTATCCAACATCTATTTGGCCTCTAGAAAATCTGAAGAGGCGAGTAGAGTTCGGAAAATGATAGGGGACAGAGGGGCAAAGAAGACACCAGGGTGCAGTGTGATTGAGGTTAATGGGCAGGTGAATGAATTTGTAGCCGGTGATTCTGGACACCCGCATTTAGCCCATATACATGCAACCCTGGATCTCATCTCCTTGGACTCGATTCATCACTCAAAAGAAACAACAACGTTAGGGGAAGGACATGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_352822.p1 GENE.S_Transcript_352822~~S_Transcript_352822.p1 ORF type:5prime_partial len:519 (+),score=80.96,PPR|PF01535.16|5.4e+03,PPR|PF01535.16|0.016,PPR|PF01535.16|0.1,PPR|PF01535.16|6.2e-07,PPR|PF01535.16|9.6e+02,PPR|PF01535.16|0.00068,PPR|PF01535.16|0.036,PPR|PF01535.16|1.2,PPR|PF01535.16|0.00088,PPR|PF01535.16|62,PPR|PF01535.16|4.4e+03,PPR_2|PF13041.2|0.00033,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|2.9e-10,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|0.16,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|1.5e+03,PPR_2|PF13041.2|6.1e+03,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|98,PPR_3|PF13812.2|0.81,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|23,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|4.5,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|38,PPR_1|PF12854.3|0.41,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|4e+02,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|2e+02,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|0.0048 S_Transcript_352822:2-1558(+)
SNLITLPPFMNVTSIINPRAWQRLMTLITRCQNMRQLKPIHALFITHGLAFNTFAISKLLEFTALSNGGDLSYALLLFRHFPSPNAFFYNTLIRSYSKSSYPHFSLHYFNLMLKDTNVVPDQHTFPFVLIACGYGCWVSEGRKVHTLLMKNGLDSDVYIQTALIRFYCNCGGLVDARKVFDEIPQRDVVKWNVLMNGYVKGGLASECLSLFKDMLVSGVEPDEFCVTTAVNACAKIGILCQGKWMHEYIKRRGNMVSDSIVGTALVDMYSKCGCVDLAIEVFEGMPERNVECWAAFIGGLAVNGYAREAIMCLDRMQEEDGLRPDGVALLGVFSACTHAGQVEEGLHLLDNMEAKYGEAPKYEHYSCVVDMLCKAGRLIEALNIIRRMPMKPLASVWGALLSGCRTHKNVELAELAVRELELLGEGRVEDGIYVELSNIYLASRKSEEASRVRKMIGDRGAKKTPGCSVIEVNGQVNEFVAGDSGHPHLAHIHATLDLISLDSIHHSKETTTLGEGHA*

Click here to download the sequence:
Link to NCBI Protein BLAST