Transcript Information: S_Transcript_35291.p1


Annotated TAIR IDAT4G28600.1
Annotated Gene Nameno pollen germination related 2
Annotated Gene Symbol(s)NPGR2
Annotation TypeHomolog
Chromosome Positionchr4:14130046-14132599 | Forward length=739
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.954244041256
Replicate 214.974466347799
Replicate 315.287720035919
Condition 2: 8 Hour
Replicate 123.787153038026
Replicate 225.109988667955
Replicate 322.946406183944
Condition 3: 24 Hour
Replicate 120.811884827618
Replicate 219.133426462925
Replicate 316.382051094839


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35291.p1 GENE.S_Transcript_35291~~S_Transcript_35291.p1 ORF type:complete len:719 (+),score=186.54,TPR_2|PF07719.13|9.4e+03,TPR_2|PF07719.13|40,TPR_2|PF07719.13|4.5,TPR_2|PF07719.13|2.2e+03,TPR_2|PF07719.13|52,TPR_2|PF07719.13|0.46,TPR_2|PF07719.13|53,TPR_2|PF07719.13|93,TPR_2|PF07719.13|0.95,TPR_2|PF07719.13|0.0091,TPR_2|PF07719.13|0.049,TPR_16|PF13432.2|0.051,TPR_16|PF13432.2|1.8e+02,TPR_16|PF13432.2|1.6e+04,TPR_16|PF13432.2|18,TPR_16|PF13432.2|0.2,TPR_16|PF13432.2|1.9e+03,TPR_16|PF13432.2|0.00063,TPR_16|PF13432.2|56,TPR_11|PF13414.2|1e+02,TPR_11|PF13414.2|20,TPR_11|PF13414.2|2.4e+03,TPR_11|PF13414.2|4,TPR_11|PF13414.2|0.21,TPR_11|PF13414.2|6.2e+03,TPR_11|PF13414.2|7.2e-06,TPR_11|PF13414.2|0.0089,TPR_12|PF13424.2|1.8e+02,TPR_12|PF13424.2|1e+02,TPR_12|PF13424.2|0.75,TPR_12|PF13424.2|1.2,TPR_12|PF13424.2|1.5,TPR_12|PF13424.2|0.00042,TPR_12|PF13424.2|11,TPR_1|PF00515.24|2.8e+02,TPR_1|PF00515.24|5.4,TPR_1|PF00515.24|7.6e+02,TPR_1|PF00515.24|9e+02,TPR_1|PF00515.24|1.1e+02,TPR_1|PF00515.24|2.6e+03,TPR_1|PF00515.24|1.2e+03,TPR_1|PF00515.24|5.1,TPR_1|PF00515.24|0.00028,TPR_1|PF00515.24|0.02,TPR_7|PF13176.2|4.3e+02,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|4.7e+03,TPR_7|PF13176.2|14,TPR_7|PF13176.2|3.3e+03,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|8.6,TPR_7|PF13176.2|0.054,TPR_7|PF13176.2|0.31,TPR_19|PF14559.2|8,TPR_19|PF14559.2|6.3e+02,TPR_19|PF14559.2|3.8e+02,TPR_19|PF14559.2|0.0081,TPR_19|PF14559.2|26,TPR_19|PF14559.2|0.03,TPR_19|PF14559.2|9.3e+02,TPR_19|PF14559.2|1e+04,TPR_8|PF13181.2|8.6e+02,TPR_8|PF13181.2|15,TPR_8|PF13181.2|20,TPR_8|PF13181.2|1.5e+02,TPR_8|PF13181.2|56,TPR_8|PF13181.2|1.3e+03,TPR_8|PF13181.2|1e+03,TPR_8|PF13181.2|8.7,TPR_8|PF13181.2|7.4,TPR_8|PF13181.2|0.54,TPR_14|PF13428.2|4,TPR_14|PF13428.2|2.4e+03,TPR_14|PF13428.2|4e+02,TPR_14|PF13428.2|50,TPR_14|PF13428.2|4.5e+02,TPR_14|PF13428.2|2.8e+03,TPR_14|PF13428.2|14,TPR_14|PF13428.2|0.98,TPR_14|PF13428.2|1.4e+02 S_Transcript_35291:244-2400(+)
ATGAGGAATAGGAGGAAAGTAGCAAAAGAAGTGCTGGAAAAGGGTAGTGCTAATTTGAAGTTTCGGAGTATAATGCAGTGCCTCTGCTCTCGAGAGCAGATGAGAATAAATGAGTTGTTGCCGTTGCCTGATTCATCCGGTAAGGTACAGGACAGGCTTGACACTGGAAATGTCGAAGAAGCTGAATCATCTCTTCGTGGAACTGGTCCTCTAAATTACGAGGAAGCAAGAGCATTGTTGGGAAGATATGAGTTTCAGAAAGGGAATATAGAAGCTGCTCTGCAAGTCTTTGAAGGGATCGATGTTACTTCAGTAACTCCCAAGATCAAACAGGCACTTGCTGCCAGAATAGGTGATGGTCGTGGAAGGCATTCTCAAAGTGATCCCATTACACATATGTCAATGCGTGCTGTGAGTCTGATCTTTGAGGCCATGTTCCTGAAAGCAAAGTCGCTGCAGTCTCTTGGCAAGTTTAAAGAAGCTGCTCAATCATGCAAAGTTATTCTGGACATTGTTGAATCTTCATTACCAGATGGCTTGCCTGGAAACTTTGGTGCTGACTCTAAATTGCAGGAGACAGTAACTAGTGCTGTGGGGCTGCTTCCAGAATTGTGGAAGCTTGCTGATTGTCCAAATGATGCAATTTTGTCATACCGGCAAGCCCTTCTTCATCTTTGGAACCTTGATGCTGAAACTTCTACTAGAATACAAAAGGAATTTGCTATTTATCTATTGTATAGTGGCTGTGAAGCAAGCCCTCCAAACTTGCGTTCACAAATTGATACCTCATTTGTACCTAAAAGCAATTTGGAAGAGGCTATCCTGCTGCTGATGCTTTTGTTGGGTAAAGTAACCGGTGGAGCAGCCAAGTGGGATCCCTCAGTCGTGGATCATTTATCATATGCTCTAGCAGTCTCAAATCAACCCTATTCCTTAGCCTCTATTATAGAAGCATTGCCTCCGGGGATTATTGAAAGAAAGAAAATGTATCATATTTTGGCTCTATGTTATCAAGCAGTTGGTGATAACCTTGCTGCTTTGAATCTTCTCAGGAAGCTATTGCATCATACAGAGGATCCTAATCATATTCCTGGTTTACTAATGGCTTCAAAGATATGTGGTGAAATCACTGATTTGGCAGAAGAAGGGAGCACATATGCTCGAAGAGCTTTAGGGGTCAAGGAGGATGAATGTCCTCATTCAGTTGGTCTTACTAATTTATTACTGGGTGTATCACTTTCAGAATTTGCTAAATCAGCAATTGCTGATTCTGATAGGGTCAAAAGGCAGTCAGATGCAGTTCAGGCACTTGAATATGCTGGGAAGTTGACAAATATGGGGGACCCTAAAGTTCTGTATCATCTAAGTCTAGAGTATGCTGAACAGAGAAAGCTGGATACTGCACTATATTATGCTGAGCAATTGTTGACATTGGAAAGTGGAAGTAATATTAAAGGATGGTTATTGTTGGCACGGATATTATCTGGAAAAAAGTGCTTTGCTGATGCAGAAACAGTTATAAATGCTGCTCTTGATCACACTGGAGAGTGGGATCAGGGAATGATCTTGAGAACAAAGGCTAAACTGCAAATTGCACAGGGTCATTTGAAAAAAGCCATGGAAACATATGTTCAGCTTCTTGGAGTTTTGAAAGTTTGTAAGAAATTTGGAACTGGGAAGAAACTCGATAAGAGTTTTGAAAACCATGAGCGGCAGTTGGAACTGCAGATATGGGATGACCTTGCTCATATATACATCAAGTTGTCACGGTGGAATGATGCTGAGAGATGTCTATCTGAATCCAAGGCTACCAGTCCTAATTCTTCTTCCAGATGGCAAGCCATAGGTTCATTACATGAAGCGAAAGGCCTTTACAAAGAGGCTCTTGATGCTTACACTATGGCTTTGGTTATTGACCCCACATATGTCCCAAGCTTGATATCCTCAGCTATGGTACTCAAACGGCGCAATGGTAAGGGCAATACAGTTGTTGGAAGCTATCTGATGAATGCACTCAAGTTTGACCGGTTAAATCATGGTGCTTGGTATAGCCTGGGCCTGCTCTACAAAGAAGATTCACGCTTCTCTGAGGCTGCAGAATGCTTTGAAGTTGCAGCTTTTCTCGAAGAGACTGCTCCTGTGGAACCATTTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35291.p1 GENE.S_Transcript_35291~~S_Transcript_35291.p1 ORF type:complete len:719 (+),score=186.54,TPR_2|PF07719.13|9.4e+03,TPR_2|PF07719.13|40,TPR_2|PF07719.13|4.5,TPR_2|PF07719.13|2.2e+03,TPR_2|PF07719.13|52,TPR_2|PF07719.13|0.46,TPR_2|PF07719.13|53,TPR_2|PF07719.13|93,TPR_2|PF07719.13|0.95,TPR_2|PF07719.13|0.0091,TPR_2|PF07719.13|0.049,TPR_16|PF13432.2|0.051,TPR_16|PF13432.2|1.8e+02,TPR_16|PF13432.2|1.6e+04,TPR_16|PF13432.2|18,TPR_16|PF13432.2|0.2,TPR_16|PF13432.2|1.9e+03,TPR_16|PF13432.2|0.00063,TPR_16|PF13432.2|56,TPR_11|PF13414.2|1e+02,TPR_11|PF13414.2|20,TPR_11|PF13414.2|2.4e+03,TPR_11|PF13414.2|4,TPR_11|PF13414.2|0.21,TPR_11|PF13414.2|6.2e+03,TPR_11|PF13414.2|7.2e-06,TPR_11|PF13414.2|0.0089,TPR_12|PF13424.2|1.8e+02,TPR_12|PF13424.2|1e+02,TPR_12|PF13424.2|0.75,TPR_12|PF13424.2|1.2,TPR_12|PF13424.2|1.5,TPR_12|PF13424.2|0.00042,TPR_12|PF13424.2|11,TPR_1|PF00515.24|2.8e+02,TPR_1|PF00515.24|5.4,TPR_1|PF00515.24|7.6e+02,TPR_1|PF00515.24|9e+02,TPR_1|PF00515.24|1.1e+02,TPR_1|PF00515.24|2.6e+03,TPR_1|PF00515.24|1.2e+03,TPR_1|PF00515.24|5.1,TPR_1|PF00515.24|0.00028,TPR_1|PF00515.24|0.02,TPR_7|PF13176.2|4.3e+02,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|4.7e+03,TPR_7|PF13176.2|14,TPR_7|PF13176.2|3.3e+03,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|8.6,TPR_7|PF13176.2|0.054,TPR_7|PF13176.2|0.31,TPR_19|PF14559.2|8,TPR_19|PF14559.2|6.3e+02,TPR_19|PF14559.2|3.8e+02,TPR_19|PF14559.2|0.0081,TPR_19|PF14559.2|26,TPR_19|PF14559.2|0.03,TPR_19|PF14559.2|9.3e+02,TPR_19|PF14559.2|1e+04,TPR_8|PF13181.2|8.6e+02,TPR_8|PF13181.2|15,TPR_8|PF13181.2|20,TPR_8|PF13181.2|1.5e+02,TPR_8|PF13181.2|56,TPR_8|PF13181.2|1.3e+03,TPR_8|PF13181.2|1e+03,TPR_8|PF13181.2|8.7,TPR_8|PF13181.2|7.4,TPR_8|PF13181.2|0.54,TPR_14|PF13428.2|4,TPR_14|PF13428.2|2.4e+03,TPR_14|PF13428.2|4e+02,TPR_14|PF13428.2|50,TPR_14|PF13428.2|4.5e+02,TPR_14|PF13428.2|2.8e+03,TPR_14|PF13428.2|14,TPR_14|PF13428.2|0.98,TPR_14|PF13428.2|1.4e+02 S_Transcript_35291:244-2400(+)
MRNRRKVAKEVLEKGSANLKFRSIMQCLCSREQMRINELLPLPDSSGKVQDRLDTGNVEEAESSLRGTGPLNYEEARALLGRYEFQKGNIEAALQVFEGIDVTSVTPKIKQALAARIGDGRGRHSQSDPITHMSMRAVSLIFEAMFLKAKSLQSLGKFKEAAQSCKVILDIVESSLPDGLPGNFGADSKLQETVTSAVGLLPELWKLADCPNDAILSYRQALLHLWNLDAETSTRIQKEFAIYLLYSGCEASPPNLRSQIDTSFVPKSNLEEAILLLMLLLGKVTGGAAKWDPSVVDHLSYALAVSNQPYSLASIIEALPPGIIERKKMYHILALCYQAVGDNLAALNLLRKLLHHTEDPNHIPGLLMASKICGEITDLAEEGSTYARRALGVKEDECPHSVGLTNLLLGVSLSEFAKSAIADSDRVKRQSDAVQALEYAGKLTNMGDPKVLYHLSLEYAEQRKLDTALYYAEQLLTLESGSNIKGWLLLARILSGKKCFADAETVINAALDHTGEWDQGMILRTKAKLQIAQGHLKKAMETYVQLLGVLKVCKKFGTGKKLDKSFENHERQLELQIWDDLAHIYIKLSRWNDAERCLSESKATSPNSSSRWQAIGSLHEAKGLYKEALDAYTMALVIDPTYVPSLISSAMVLKRRNGKGNTVVGSYLMNALKFDRLNHGAWYSLGLLYKEDSRFSEAAECFEVAAFLEETAPVEPFR*

Click here to download the sequence:
Link to NCBI Protein BLAST