Transcript Information: S_Transcript_35399.p1


Annotated TAIR IDAT2G36990.1
Annotated Gene NameRNApolymerase sigma-subunit F
Annotated Gene Symbol(s)SIGF, SIG6, ATSIG6, SOLDAT8
Annotation TypeOrtholog
Chromosome Positionchr2:15537502-15540016 | Reverse length=547
E-Value1.5E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.645881216464
Replicate 240.703431099722
Replicate 347.486679952482
Condition 2: 8 Hour
Replicate 146.620105109353
Replicate 249.111923199984
Replicate 347.84396451483
Condition 3: 24 Hour
Replicate 139.185256334405
Replicate 241.191891113215
Replicate 336.820502781191


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35399.p1 GENE.S_Transcript_35399~~S_Transcript_35399.p1 ORF type:complete len:548 (+),score=109.55,Sigma70_r3|PF04539.12|2.6e+03,Sigma70_r3|PF04539.12|0.18,Sigma70_r3|PF04539.12|1e-17,Sigma70_r3|PF04539.12|5.7e+02,Sigma70_r4|PF04545.12|1.7e+03,Sigma70_r4|PF04545.12|4.4e+02,Sigma70_r4|PF04545.12|4.9e+02,Sigma70_r4|PF04545.12|3.5e-18,Sigma70_r2|PF04542.10|4.7e-16 S_Transcript_35399:482-2125(+)
ATGGAAGCTGTCATGAATTTGCTTTCTTCATCTTCTCCATTTCCTTCAAGGACCCACCTCAGAAACAGTCCATTGTCTCTTTCAGCTTCCATGCTTAAAGAGCAAACATCTGCCATTCCTTCCATACCAACTTCTTCCTTATGGAGACAATATCGCACCTCTGTTCTTTCACAGGAGCAGCGTGATGAGTGTAGGCCTTCCTTGCTCAATGTAAAGGAGGATAGGACGTCTCAGTTGCAGTCAACCTTGATCAGAAAGAAGATTGAGGATTGTGCATCTGTACTAGAACTCATGGGGACTCCTGATCAGCATCTTGGTGATTTTAATGATCAACTTTGCTTTTGGTCTGGTTTATCATATCTACTGCCAACTCTGGAAAAGGAAGAACATCCAGCCTTAGCTGCTGTGGATAATCACATGCGTACAGATATGGCTGCATCTGATGTAATCTCCCTGGCTAGGGAAGCTCTTTCAGCCTCAAAACTAGCCTTGTCATTAGCTGAGAGCTCTGATCTATTGGATGCTGATAGGCTAAATGATAAAACATTGAAGCCAAGAAGAGTAATGTCTACCAGGCTTCTGGAGAGGAAAGCTAAGAAAAGGACATCCTCGAAGCCTAAAATAATTCATAACACTGGAAACTCTGAAAAGCCACAATCAAGAAGGTCAAGTGAAAGGGTTGATCGTACTGACCCCCTTCGACTGTTTTTGGGGGATCCAGAGACGAAGCAACTATTGACAATAGAAGAAGAAAATGAATCGATAAGACAGATTCAGGACCATATTAAATTGCTTGATGTGAAGAGAAATCTTCAGGCTCAATTTGACCGTGAACCAACATTTGCTGAGTGGGCTAATGCTGTTGGGCTGAGTTCAATGGCTCTGCGCTCAAAAGTTCACGCTTGGAAGAGAAGTCGGGAAAAGTTGATATATGCTAACTTCCGTTTGGTGGTTCACATAGCAAAACAATATCAGGGTCGTGGCCTCAGTCTTCAGGATCTATTGCAGGAAGGAAGCATGGGTTTAATGAAGAGCGTGGAAAAGTTCAAGCCGCAGGCTGGTTGTCGATTTCCAAGTTATGCCTATTGGTGGATAAGGCAATCAATTAGGAAGGCGATATTCCAGCATTCAAGGACAATCCGTGTGCCAGAAAACATGTATGGCCTTCTCGGCAAGGTCCTTGAAGCGAGAAAAGCATACATCCAAGAAGGAAACCAGTATCCAACAACAGAAGAACTGGCAAAACATGTTGGAATTACAGTTGCAAAGCTTCAGAACTTGCTATGTTTGATGAGAAATCCTCTTTCGATGCAACAGCCTGTGTGGACAGATCAGGATACCACTTTTCAGGAGGTGACTGCAGACACAAGAATCGAGAGCCCAGAAATAAGCGTGGAAAGGCAACTCATGAGGAAACATGTACGTAATCTACTTGGTGCTCTCACTCCTAGAGAACGGCAAATAATAAAGCTGAGATATGGGATCGGATCTGGGTCCGAGAAACAAAGTACTTTAACCGAAATTGGGACTGTCTTTGGGCTGTCGAAGGAGAGGGTCCGGCAGATAGAAAGTCGAGCACTGTACAAGCTTAAGCAATCACTCAACAACCATGGCTTAGAAGCATATACAGATTTACTCGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35399.p1 GENE.S_Transcript_35399~~S_Transcript_35399.p1 ORF type:complete len:548 (+),score=109.55,Sigma70_r3|PF04539.12|2.6e+03,Sigma70_r3|PF04539.12|0.18,Sigma70_r3|PF04539.12|1e-17,Sigma70_r3|PF04539.12|5.7e+02,Sigma70_r4|PF04545.12|1.7e+03,Sigma70_r4|PF04545.12|4.4e+02,Sigma70_r4|PF04545.12|4.9e+02,Sigma70_r4|PF04545.12|3.5e-18,Sigma70_r2|PF04542.10|4.7e-16 S_Transcript_35399:482-2125(+)
MEAVMNLLSSSSPFPSRTHLRNSPLSLSASMLKEQTSAIPSIPTSSLWRQYRTSVLSQEQRDECRPSLLNVKEDRTSQLQSTLIRKKIEDCASVLELMGTPDQHLGDFNDQLCFWSGLSYLLPTLEKEEHPALAAVDNHMRTDMAASDVISLAREALSASKLALSLAESSDLLDADRLNDKTLKPRRVMSTRLLERKAKKRTSSKPKIIHNTGNSEKPQSRRSSERVDRTDPLRLFLGDPETKQLLTIEEENESIRQIQDHIKLLDVKRNLQAQFDREPTFAEWANAVGLSSMALRSKVHAWKRSREKLIYANFRLVVHIAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQSIRKAIFQHSRTIRVPENMYGLLGKVLEARKAYIQEGNQYPTTEELAKHVGITVAKLQNLLCLMRNPLSMQQPVWTDQDTTFQEVTADTRIESPEISVERQLMRKHVRNLLGALTPRERQIIKLRYGIGSGSEKQSTLTEIGTVFGLSKERVRQIESRALYKLKQSLNNHGLEAYTDLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST