Transcript Information: S_Transcript_35432.p1


Annotated TAIR IDAT1G44910.1
Annotated Gene Namepre-mRNA-processing protein 40A
Annotated Gene Symbol(s)ATPRP40A, PRP40A
Annotation TypeOrtholog
Chromosome Positionchr1:16975930-16982818 | Forward length=958
E-Value1E-293
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.532300535245
Replicate 210.144557159289
Replicate 39.4383414074897
Condition 2: 8 Hour
Replicate 113.861503706136
Replicate 213.927572437477
Replicate 311.640124623504
Condition 3: 24 Hour
Replicate 111.029524507506
Replicate 210.176495786242
Replicate 310.92955257555


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35432.p1 GENE.S_Transcript_35432~~S_Transcript_35432.p1 ORF type:complete len:1020 (+),score=288.90,FF|PF01846.15|1.1e-16,FF|PF01846.15|7.6e-16,FF|PF01846.15|8.9e-08,FF|PF01846.15|2.9e-06,FF|PF01846.15|3.7e+03,FF|PF01846.15|0.0015,WW|PF00397.22|3.3e-07,WW|PF00397.22|3.1e-08 S_Transcript_35432:261-3320(+)
ATGGCAAACAACCCTCAATTTTCTGGTGCACCGGGTCCGCCTCTCCGTCCACCTATGGTTGGTTCTGTTGGTCCCCCTCAAATTGTTCCTCCACCCATGCCGGCTCAGTTTCGGCCCATGGCTTCTGTGCATCCATCTCAACCGTTTGCTCCCCAAGTATCTCAACAGTATCAGTCTCTTGGAGCTGGTATTCCTGCAATGAATGTAGGAATGCCTCCACAACAAATCCAACAACTGCAGTTTGCTCAACCAATGCAACAAACACCTGCGAGGCCTATCCTGCCAGGTCACCTTCCTCCTATGTCACAGTCTATGCCATTGTCTAACCTTAACAGGCCTATGTCCTCTGGATTGCAACAGCCTGTGCAAAATATGCAGGCTCCAGGTAGCTTTATCCCTGCCTCAGGTGGTCAAGGAATGCCTCTTCCTCCATCATATGCTCCAAATACTTTCCCCACATCTCAATATCAGCCAGTATCTCAATTGAATGCTCAGAACAATCCTGTTTCTGGGCCACCTTTTCTGGCCTCTGGAAATCAGGATGCTGTTTCAATAACACCATCGCAGCTGGATGAACAGACTTTAACATCTGTTTCCTCAGTTTCGACAGTTGATTCTCAGCCTAAGAATATGGAACAATCTTCCTCTGACTGGTTGGAACACACCAATAATGGAAGAAGATTTTACTACAACAAGAAGACAAGGCAGTCTACTTGGGAGAAACCTTTGGAGCTGATGACTCCTCTTGAGAGAGCTGATGCAACTACCAACTGGAAGGAGTACACAAGTCCTGATGGAAGAAAGTATTTCTATAACAAAGTTACAAAACAGTCAAAGTGGACCATTCCCGAAGAGCTCAAGCTGGCTCGGGAACAAGCAGAAAAGGGAGGATCCTCTGTAATGAAAGTTGCTGGAAACTCTCATCCTCCAGACTCTGCTCCTTTAACTGATGACAAAACACCATCTAATGCTGATACAAAATCTAGTAATCCTGTGGTGACTTCAAGTCCAGTAGCAGTGACACCTGTGACTGTTTCTGCCACATCACCAAGTTCTACATCAAATGCAATGGATTCCTTGTCTCTTAGGGACCAGGGGAAACTGACGGATGCAGTTGAAGATCATTCACATGCTGAAACATCCTCTATTGTTGCTGTTAGTGCAGCTGCCTCTGGAAATGCTGACTTGCTTGCTGCTTCTGCTGGCACTGCAGATTTTCCAATGAATGGATCTAGTTCAGTTGCCGATGAAGCTGCAGATTCTCAGAAAAACGTTATTGCAGAGGATGGCGAGGAACCCAATAAGAGTGCAGACACTCCTGGGAAGACAAATGTCATTACCACAGAAGAAAAACCAATTGAGCGTGAAACCGTAACTTATGCTAGCAAACAGGAAGCAAAAGAGGCATTTAAATCACTTCTTGAATCAGCAAATGTTGAGTCTGATTGGACCTGGGAGCAGGCTATGAGGTTAATCATCAATGACAAAAGATATGCTGCTCTTAGATCACTTGGAGAACGGAAGCAAGCTTTCAATGAGTACTTGAGTCAACGACGAAAACAGGAGGCTGAGGAAAGGCGTGCAAAATACAAAAAAGCGAGGGAGGACTTCAGGAAAATGTTGGAAGAATGTAGCGAGCTGACTTCAACGACAAGATGGGGGAAAGCAGTTAATATGTTTGGTGATGATGAGCGTTTTAAAGCCATTGAGCGAGCAAGAGATCGTCAAGATTTGTTTGAGGAGTATTTGTCTGAACTTGAAAAGAAGGAACGAGCAAAAGCAGAAGAAGAACGTCTGCGGAATATAACAGAGTACAGGAAATTTCTGGAATCGTGTGACTTTATCAAGGCAAGTAGTCAATGGCGGAAAGTCAAAGACCGTTTGGAGGCTGATGAAAGATGTAGACGACTCGAAACAATAGATAGATTGAAACTTTTTCAGGAATATGTCGGTGATTTGGAGAAGGATGAGGAAGAGCAAAGGAGAATACAAAAGGAAGAATTAAGAAAAAGCGAACGGAGAAACCGTGATGAGTTTCGCAAGTTGATGGAAGAACATGTTGCTGTTGGCACTCTAACGGCCAAGACTAATTATCGTGATTATCATTCAAAGGTAAAAGATCTACCGGCATATCTGGCAGTCGCTTCCAATAGTGCAGGTTCAACTCCTAAAGAGTTGTTTGAGGATGTAACTGAAGAGCTTAAGAAACAGTATCAAGAAGATAGGACAAGGATTAAGGATGCAGTCAAGTCTGAAAAGGTTGCCTTATCTTCGATCTGGACCCTTGAAGACTTCAAAGCTGCAATTTCCAATGAGATCAGCTCCACCGAAGTGTCAGAGAACAACTTAAAGCTAGTTTTTGACGAGTTGCTGGAAAGAGTCAGAGAGAAGGAAGAAAAAGAAGCAAAAAGGCGAAAGAGACTTGGAGATGAATTCTTTAACTTGCTGTGTTCCCTTAAGGATATCACTGGTGATTCAAAGTGGGAGGAGTGCCTACCACTTTTTGATGCCCGAGAAGAGTTTAGGTCAATTGGGGAAGAGGCTTTTTCTAAGCAGATCTTTGAGGAATATCTTGCACAGTTGAAAGAAAAGGAAAAGGAGAAGGAACGAAAGAGAAAAGAGGAGAAGGCAAAAAAAGATAAGGAGAGGGAAAGAGACAAAAGGTCCAAGGAAAGAAGAGATAAAGACCGGAGGCATGATAGGGAGAGAGGGAAAGAACGGGTTGACAAGGATGACGGAGATGGTGGACCTGATTTTAATGAAATTTCTGTATCAATTGAAAACAGAAAATCAGGAAGAGACAAGGATAGGAAGCATCGGAAACGGCATCATGAGGAAGAGAATGATGTCAGTTTGGAGAAGAATGGAAAGGATCATTCTAAGAGTTCCCATAGGCATAGCAGTGAACGCAAAAGGTCTAGACAGGTGGAACAGTACGAGGATATACCTGAATCTGACAGCGAAAGTAAGAATAAGAAACACAAGAGAGAGCATCGTAATGGTTCTCGTAAAAGAGGTGACACTGAGGAACTTGAAGATGGGGAGCTTGGTAACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35432.p1 GENE.S_Transcript_35432~~S_Transcript_35432.p1 ORF type:complete len:1020 (+),score=288.90,FF|PF01846.15|1.1e-16,FF|PF01846.15|7.6e-16,FF|PF01846.15|8.9e-08,FF|PF01846.15|2.9e-06,FF|PF01846.15|3.7e+03,FF|PF01846.15|0.0015,WW|PF00397.22|3.3e-07,WW|PF00397.22|3.1e-08 S_Transcript_35432:261-3320(+)
MANNPQFSGAPGPPLRPPMVGSVGPPQIVPPPMPAQFRPMASVHPSQPFAPQVSQQYQSLGAGIPAMNVGMPPQQIQQLQFAQPMQQTPARPILPGHLPPMSQSMPLSNLNRPMSSGLQQPVQNMQAPGSFIPASGGQGMPLPPSYAPNTFPTSQYQPVSQLNAQNNPVSGPPFLASGNQDAVSITPSQLDEQTLTSVSSVSTVDSQPKNMEQSSSDWLEHTNNGRRFYYNKKTRQSTWEKPLELMTPLERADATTNWKEYTSPDGRKYFYNKVTKQSKWTIPEELKLAREQAEKGGSSVMKVAGNSHPPDSAPLTDDKTPSNADTKSSNPVVTSSPVAVTPVTVSATSPSSTSNAMDSLSLRDQGKLTDAVEDHSHAETSSIVAVSAAASGNADLLAASAGTADFPMNGSSSVADEAADSQKNVIAEDGEEPNKSADTPGKTNVITTEEKPIERETVTYASKQEAKEAFKSLLESANVESDWTWEQAMRLIINDKRYAALRSLGERKQAFNEYLSQRRKQEAEERRAKYKKAREDFRKMLEECSELTSTTRWGKAVNMFGDDERFKAIERARDRQDLFEEYLSELEKKERAKAEEERLRNITEYRKFLESCDFIKASSQWRKVKDRLEADERCRRLETIDRLKLFQEYVGDLEKDEEEQRRIQKEELRKSERRNRDEFRKLMEEHVAVGTLTAKTNYRDYHSKVKDLPAYLAVASNSAGSTPKELFEDVTEELKKQYQEDRTRIKDAVKSEKVALSSIWTLEDFKAAISNEISSTEVSENNLKLVFDELLERVREKEEKEAKRRKRLGDEFFNLLCSLKDITGDSKWEECLPLFDAREEFRSIGEEAFSKQIFEEYLAQLKEKEKEKERKRKEEKAKKDKERERDKRSKERRDKDRRHDRERGKERVDKDDGDGGPDFNEISVSIENRKSGRDKDRKHRKRHHEEENDVSLEKNGKDHSKSSHRHSSERKRSRQVEQYEDIPESDSESKNKKHKREHRNGSRKRGDTEELEDGELGNW*

Click here to download the sequence:
Link to NCBI Protein BLAST