Transcript Information: S_Transcript_354491.p1


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value8E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.2121422072838
Replicate 30
Condition 2: 8 Hour
Replicate 10.20505182997243
Replicate 20.10755696461407
Replicate 30.30744010968723
Condition 3: 24 Hour
Replicate 10.21004695664033
Replicate 20.10896063257859
Replicate 30.12125982887075


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_354491.p1 GENE.S_Transcript_354491~~S_Transcript_354491.p1 ORF type:5prime_partial len:208 (+),score=30.07,zf-RVT|PF13966.2|7.1e-17 S_Transcript_354491:2-625(+)
GATCAGCCAAATAATGCATCTTGGATGATTAAAAAGATTTTTAATATGAGGAAATTCATGAATCAATTGGGGAGTTGGAGTAATGTGATTAAGGGGCAGAAATTCAGTATCAGAGCTGCATATAAAATGCTACAAGGTGATGTGGAGAAGGTGAAATGGAGAGGTCTTATTTGTGATAATCAAGCTCAGTCTAAATGTCAATTTATGGTGTGGCTTCTTATGCTGGGAAAATTAAGAACAAAGGATAGATTGAGAGCATGGGGGGTGCAGGTTGATCCCATCTGTGTACTGTGTAAAACACAGGATGAAAGCCAGGAACATCTATTCTCTGATTTTGTCTACAGTATGCAGGTCTGGAGCTTAGTTCTGAGGTGGTTGAAAATGAGGAGCCCTGTGTGTAACTGGCAGCGGAAGCTTGACTGGTTCATTCATAAAATAAAAGGGAAGAAAGCTAACGCAACAATTGCAACAGTGATATACAACATATGGCAGGAAAGGAACAATAGAGTTTTTAATAAGCAGGAGAGACCTCCAGAGATGCTCACTAAACAGATTCAAAGTTTGGTTTGCCTTAGGAGTGTTAAGCATGATAAGTGCTTCAGATGGCTGGAAACATTGTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_354491.p1 GENE.S_Transcript_354491~~S_Transcript_354491.p1 ORF type:5prime_partial len:208 (+),score=30.07,zf-RVT|PF13966.2|7.1e-17 S_Transcript_354491:2-625(+)
DQPNNASWMIKKIFNMRKFMNQLGSWSNVIKGQKFSIRAAYKMLQGDVEKVKWRGLICDNQAQSKCQFMVWLLMLGKLRTKDRLRAWGVQVDPICVLCKTQDESQEHLFSDFVYSMQVWSLVLRWLKMRSPVCNWQRKLDWFIHKIKGKKANATIATVIYNIWQERNNRVFNKQERPPEMLTKQIQSLVCLRSVKHDKCFRWLETLY*

Click here to download the sequence:
Link to NCBI Protein BLAST