Transcript Information: S_Transcript_35506.p1


Annotated TAIR IDAT1G53540.1
Annotated Gene NameHSP20-like chaperones superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19980510-19980983 | Forward length=157
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.27927581718373
Replicate 30.11672617774431
Condition 2: 8 Hour
Replicate 10.53988329916792
Replicate 20.56637591492979
Replicate 30.26982085575926
Condition 3: 24 Hour
Replicate 10.13825875626958
Replicate 20
Replicate 30.15963319243744


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35506.p1 GENE.S_Transcript_35506~~S_Transcript_35506.p1 ORF type:3prime_partial len:158 (+),score=19.35,HSP20|PF00011.17|6.4e-06 S_Transcript_35506:62-532(+)
ATGTATTGCCCTCATTGTCTTCTACATAACAAAAACTCTTCCCCCTTTCATACTAAAAACTTGTTCCCAAGAACAACTCAATTGCAACCATCCCTACACAATCTTACAAACAAAATGCATGCAATGGCACCATACCAAGGGTTTTATGGGCCAAACCAAGAGATGTTTGACCCATATTCACTCTATTTTTGGGATCCTTTTCATCAAGAATTTCCCCTCCCTTCACCCCTCATGATGATGCCACCACCACCACCACAACTACCACCACCATCAATGCTATCAAATTTTCGACCCGCGGCTAAGACAAAAATTGAGTACAAAGAAGCCCCGGACGCTCACCACTTCAAGGCGGAGCTTCCGGGGATAAGAAAAGAAGATGTAAAGATACAAGTTGAGAATGGCAACATGATGCACATAAGTGCAAAAAGAAACCATAAGATGGAGGAAAAAAAAGACAAAAACCATCATGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35506.p1 GENE.S_Transcript_35506~~S_Transcript_35506.p1 ORF type:3prime_partial len:158 (+),score=19.35,HSP20|PF00011.17|6.4e-06 S_Transcript_35506:62-532(+)
MYCPHCLLHNKNSSPFHTKNLFPRTTQLQPSLHNLTNKMHAMAPYQGFYGPNQEMFDPYSLYFWDPFHQEFPLPSPLMMMPPPPPQLPPPSMLSNFRPAAKTKIEYKEAPDAHHFKAELPGIRKEDVKIQVENGNMMHISAKRNHKMEEKKDKNHHV

Click here to download the sequence:
Link to NCBI Protein BLAST