Transcript Information: S_Transcript_35524.p1


Annotated TAIR IDAT3G26900.1
Annotated Gene Nameshikimate kinase like 1
Annotated Gene Symbol(s)SKL1, ATSKL1
Annotation TypeOrtholog
Chromosome Positionchr3:9912314-9914424 | Reverse length=280
E-Value3.5E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.837184784126
Replicate 217.325380756821
Replicate 317.25470707208
Condition 2: 8 Hour
Replicate 120.605821932199
Replicate 227.655996938067
Replicate 325.565939918858
Condition 3: 24 Hour
Replicate 116.350158195414
Replicate 220.091538483326
Replicate 320.038372702224


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35524.p1 GENE.S_Transcript_35524~~S_Transcript_35524.p1 ORF type:complete len:326 (+),score=79.19,SKI|PF01202.18|1e-25 S_Transcript_35524:34-978(+)
ATGGAGAAGATAAGCCCATCAGCAATCAACTCCAACTCCATTTCCATTTCTAAGCTTAACCCACTTCTTCTAATTCAACAACCATGTCGTTTGCTTTCCCATATTTCTTGTGTTTCTTCAAAAAAACCCAGCTCCCCTTTTCATAATCTTTTATCTTATTCTTATTTCCCTCAAAATGTCCCAATAAGAGTTGGCCAAAATTGGGGGCAACAACTCACCACCACTTGGGCACTTTCTGATGAAACTACTGCTGCTGTGGATTCAGCAACAAAACCAGTTAATGGTGATCCATCCCTTGCAGTGAAGAAGAAAGCAACAGATGTGCGTGCTGACTCGAAAGGGACATCAATATTCCTTGTGGGTATGAACAGTGCAATGAAGACTGGTGTTGGGAAGCTTATTGCTGACGTCTTGCGCTATTACTACTTTGATAGTGATAATGTAATTGAAGAGGCAGCTGGTGAGGATTCTTCTGGCAGATCTTTCAAAGATAGAGATGAAAGTGGATTTCGTGAATCGGAGACTGAGGTATTGAAGCAATTATCATCCATGGGACGACTGGTGGTCAATGCTGGAAATGGTGCAGTTCAGAGTGCACCTAATCTTGCACTTTTAAGACATGGAATTTCAATATGGATAGATGTTCCTTTGGACATGATAGCTAAGGGAGTCATAACAGATAATGGACAATTGACGGTGTCCAACATAGCTTCCCCATATTCCTTCTCCGAGGCATTAAGCCACTTAACTAGACTTTATGAAGACAACAGAGCTGGATATGCTACTGCAGATGTAACTATATCAGTTCAAAATGTGGCTTCAAAGTTTGGCTACGATGAATTGGAACAAGTAACTGCTGAAGACATGGCACTGGAGGTTCTAAAGGAGATAGAAAAGCTTACGAGAGTGAAGAAGATGATGCAAGAAGCTGGAAAGCCATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35524.p1 GENE.S_Transcript_35524~~S_Transcript_35524.p1 ORF type:complete len:326 (+),score=79.19,SKI|PF01202.18|1e-25 S_Transcript_35524:34-978(+)
MEKISPSAINSNSISISKLNPLLLIQQPCRLLSHISCVSSKKPSSPFHNLLSYSYFPQNVPIRVGQNWGQQLTTTWALSDETTAAVDSATKPVNGDPSLAVKKKATDVRADSKGTSIFLVGMNSAMKTGVGKLIADVLRYYYFDSDNVIEEAAGEDSSGRSFKDRDESGFRESETEVLKQLSSMGRLVVNAGNGAVQSAPNLALLRHGISIWIDVPLDMIAKGVITDNGQLTVSNIASPYSFSEALSHLTRLYEDNRAGYATADVTISVQNVASKFGYDELEQVTAEDMALEVLKEIEKLTRVKKMMQEAGKPF*

Click here to download the sequence:
Link to NCBI Protein BLAST