Transcript Information: S_Transcript_35528.p1


Annotated TAIR IDAT3G26900.1
Annotated Gene Nameshikimate kinase like 1
Annotated Gene Symbol(s)SKL1, ATSKL1
Annotation TypeHomolog
Chromosome Positionchr3:9912314-9914424 | Reverse length=280
E-Value4E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.57788937602
Replicate 233.807980469015
Replicate 334.064818413239
Condition 2: 8 Hour
Replicate 136.253163539126
Replicate 237.834744023067
Replicate 333.41572580428
Condition 3: 24 Hour
Replicate 128.012850593821
Replicate 227.529865238328
Replicate 325.370409372205


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35528.p1 GENE.S_Transcript_35528~~S_Transcript_35528.p1 ORF type:complete len:340 (+),score=70.70,SKI|PF01202.18|2.5e-25 S_Transcript_35528:34-1020(+)
ATGGAGAAGATAAGCCCATCAGCAATCAACTCCAACTCCATTTCCATTTCTAAGCTTAACCCACTTCTTCTAATTCAACAACCATGTCGTTTGCTTTCCCATATTTCTTGTGTTTCTTCAAAAAAACCCAGCTCCCCTTTTCATAATCTTTTATCTTATTCTTATTTCCCTCAAAATGTCCCAATAAGAGTTGGCCAAAATTGGGGGCAACAACTCACCACCACTTGGGCACTTTCTGATGAAACTACTGCTGCTGTGGATTCAGCAACAAAACCAGTTAATGGTGATCCATCCCTTGCAGTGAAGAAGAAAGCAACAGATGTGCGTGCTGACTCGAAAGGGACATCAATATTCCTTGTGGGTATGAACAGTGCAATGAAGACTGGTGTTGGGAAGCTTATTGCTGACGTCTTGCGCTATTACTACTTTGATAGTGATAATGTAATTGAAGAGGCAGCTGGTGAGGATTCTTCTGGCAGATCTTTCAAAGATAGAGATGAAAGTGGATTTCGTGAATCGGAGACTGAGGTATTGAAGCAATTATCATCCATGGGACGACTGGTGGTCAATGCTGGAAATGGTGCAGTTCAGAGTGCACCTAATCTTGCACTTTTAAGACATGGAATTTCAATATGGATAGATGTTCCTTTGGACATGATAGCTAAGGGAGTCATAACAGATAATGGACAATTGACGGTGTCCAACATAGCTTCCCCATATTCCTTCTCCGAGGCATTGAGCCATTTAACTGGGCTTTATGAAGAGAACAGAGCTGGATTTGCTACTGCAGATGTAACTATATCAGTTCAAAATGTGGCTTCAACGTTTGGCTACGATGAATTTGAACAAGTAACTGCCGAAGACATGGCATTGGAGGTAGAAAAACGTTCTTTAATTAGTGCTAATTGCTCCTCCCCTTTGCAAGATAGTCGGTTTCCCTTCCAGATTTTGTTCTCGGGTAGTTTTGTTTCTACGGTCCTATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35528.p1 GENE.S_Transcript_35528~~S_Transcript_35528.p1 ORF type:complete len:340 (+),score=70.70,SKI|PF01202.18|2.5e-25 S_Transcript_35528:34-1020(+)
MEKISPSAINSNSISISKLNPLLLIQQPCRLLSHISCVSSKKPSSPFHNLLSYSYFPQNVPIRVGQNWGQQLTTTWALSDETTAAVDSATKPVNGDPSLAVKKKATDVRADSKGTSIFLVGMNSAMKTGVGKLIADVLRYYYFDSDNVIEEAAGEDSSGRSFKDRDESGFRESETEVLKQLSSMGRLVVNAGNGAVQSAPNLALLRHGISIWIDVPLDMIAKGVITDNGQLTVSNIASPYSFSEALSHLTGLYEENRAGFATADVTISVQNVASTFGYDEFEQVTAEDMALEVEKRSLISANCSSPLQDSRFPFQILFSGSFVSTVLF*

Click here to download the sequence:
Link to NCBI Protein BLAST