Transcript Information: S_Transcript_35543.p1


Annotated TAIR IDAT2G46550.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19112264-19113457 | Reverse length=397
E-Value7E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6060641363923
Replicate 26.2589473922028
Replicate 310.987161922145
Condition 2: 8 Hour
Replicate 111.494536624838
Replicate 27.6159484730984
Replicate 310.884688138714
Condition 3: 24 Hour
Replicate 18.5210538438488
Replicate 29.4834388865567
Replicate 38.2284683874847


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35543.p1 GENE.S_Transcript_35543~~S_Transcript_35543.p1 ORF type:5prime_partial len:141 (+),score=34.66 S_Transcript_35543:3-425(+)
CAAGATTACTTGGATTTAAAGAGCTTGACAGATTACTATGAGTTTTTGGAAATGGACATGGTTGGAGGTTCAGTTTCGAAACCCACCTGTGAGTTTTCTAATGCCGACTCTTCTTGGGTGAAAGAAGAGAAGGTGCCCTGGTGGCGTGTTACAGATGGGGAAGCATTGGCCTCATTTGTGGCACATAAATCACTTCACCATATTGAGAACTGTGATCTTCCTCCACCTCAAAAGATGAAAGTTAGGAGGGAGCCATATAAACATGTTGATCATGATGAGATTCTAATGTCATCTATAGATTGGGAGGCTCGAAGTGAGGCTGTCTCTATTCCATCTTCTGGCGGTTCACAGAGAAAACACTGGTCTCCTGCTAAAGGAGGACGATCAAAGAACGAAAATGCAGCTACTGAACCAATTAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35543.p1 GENE.S_Transcript_35543~~S_Transcript_35543.p1 ORF type:5prime_partial len:141 (+),score=34.66 S_Transcript_35543:3-425(+)
QDYLDLKSLTDYYEFLEMDMVGGSVSKPTCEFSNADSSWVKEEKVPWWRVTDGEALASFVAHKSLHHIENCDLPPPQKMKVRREPYKHVDHDEILMSSIDWEARSEAVSIPSSGGSQRKHWSPAKGGRSKNENAATEPIR*

Click here to download the sequence:
Link to NCBI Protein BLAST