Transcript Information: S_Transcript_35588.p1


Annotated TAIR IDAT1G52360.2
Annotated Gene NameCoatomer, beta' subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19499420-19505397 | Forward length=970
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.776168976912
Replicate 256.214449645999
Replicate 351.149461948635
Condition 2: 8 Hour
Replicate 155.915266332613
Replicate 254.491779475412
Replicate 361.021838241711
Condition 3: 24 Hour
Replicate 147.330580896287
Replicate 246.957047514393
Replicate 347.284464511116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35588.p1 GENE.S_Transcript_35588~~S_Transcript_35588.p1 ORF type:complete len:918 (+),score=195.73,Coatomer_WDAD|PF04053.10|7.7e-167,WD40|PF00400.28|3.5,WD40|PF00400.28|44,WD40|PF00400.28|0.00021,WD40|PF00400.28|0.00037,WD40|PF00400.28|5.9e-06,WD40|PF00400.28|1.1e-06,WD40|PF00400.28|1.2e+04,WD40|PF00400.28|5.1e+02,WD40|PF00400.28|1.2e+04 S_Transcript_35588:254-3007(+)
ATGCCTCTCCGACTCGAGATCAAGAGGAAACTCGCTCAGAGATCAGAGAGAGTCAAGTCTGTGGATCTACATCCTACTGAGCCATGGATTCTAGCAAGTCTGTATTCAGGAACTGTGGTTATCTGGAACTACCAGTCCCAGACAATGGCAAAGTCTTTTGAAGTTTCTGAGCTTCCAGTCAGGTCTGCCAAGTTTATTGCACGGAAACAATGGGTTGTCGCTGGAGCAGATGATATGTTTGTCCGTGTCTACAACTACAACACGATGGATAAGGTTAAAGTATTTGAGGCTCACACAGATTATATCAGATGTGTAGCTGTGCATCCTACACTTCCTTATGTGTTGTCATCATCTGATGACATGCTCATCAAACTTTGGGATTGGGATAAGGGTTGGGTTTGCACTCAAATTTTTGAAGGGCACTCCCACTATGTGATGCAAGTGACGTTTAACCCTAAAGATACAAACACATTTGCTAGTGCATCCCTTGACCGCACTATAAAGATCTGGAATCTTGGCTCGCCTGATCCCAACTTTACATTGGATGCCCATTTGAAAGGGGTAAACTGTGTTGATTATTTCACGGGTGGTGACAAGCCTTACCTGATAACTGGTTCTGATGATCATACAGCAAAGGTATGGGATTATCAGACAAAAAGCTGTGTTCAGACATTGGAAGGGCACACGCACAATGTTTCTGCTGTCTGTTTCCATCCTGAACTTCCCATCATTATAACTGGCTCTGAGGATGGAACAGTTCGCATATGGCATTCAACTACTTACAGGCTTGAGAATACCCTTAATTATGGGCTTGAAAGAGTTTGGGCTATTGGATACATGAAGAGTTCCCGTCGTGTTGTAATCGGTTATGATGAAGGAACCATTATGGTGAAGATTGGCCGTGAAATCCCTGTTGCTAGCATGGACAATAGTGGTAAAATAATATGGGCCAAGCATAACGAAATTCAGACTGGTGATATCAGACGTGTTGGTGCTGGTTATGAGGTAACGGACGGGGAGAGGTTACCATTAGCAGTTAAGGAGTTGGGTACATGTGATCTTTACCCACAGTACTTAAAGCACAACCCAAATGGAAGGTTTGTTGTGGTCTGTGGAGATGGAGAATACATTATTTATACAGCAGTAGCTTGGAGAAATAGGTCATTTGGTTCAGCATTGGAGTTTGTTTGGTCATCTGAAGGAGAATATGCTGTTAGAGAAAGCACTTCCAAGATCAAGATATTTAGCAAAAATTTCCAGGAAAAGAAGAGCATCAGACCAACTTTCTCTGCTGAGCGTATATATGGTGGAATATTGCTGGCCATGTGTTCTAATGATTTTATTTGCTTCTATGATTGGGCCGACTGCAGATTGATCCATAGAATTGATGTTACCGTTAAAAATCTTTACTGGGCTGATAGTGGTGATTTGGTGGCAATTGCCAGCGACAGTTCATTTTACATCCTGAAATACAATCGTGACAAGGTTTCCGCCTATCTGGATAGTGGAAGGCCAGTTGATGAGCATGGTGTGGAGGATGCTTTTGAGCTTCTGTACGAAACAAATGAACGTGTGAGAACAGGAATATGGGTTGGAGATTGCTTCATTTACAACAACTCTTCCTGGAGGCTGAATTACTGTGTTGGTGGCGAGGTTACCACAATGTTCCACTTAGACCGGCCAATGTATCTCCTGGGCTACCTTGCCAGTCAAAGTCGGGTGTATCTTATTGACAAGGAATTCAATGTGATGGGATACACATTGCTCCTTAGCCTTATTGAATACAAGACTCTCGTGATGCGTGGGGACTTTGAGCGTGCTAATGAAATATTACCTACAATTCCAAAGGAACACCATAACAGTGTGGCTCGGTTCCTTGAATCACGAGGAATGATAGAGGAGGCTCTTGAAGTAGCGACTGATCCTGACTATAGGTTTGAGCTTGCCATACAGCTAGGCAGATTAGAGGTTGCAAAGGAGATAGCTACTGAGGTCCATAGTGAGGCCAAGTGGAAGCAGTTGGGAGAGCTGGCCATGTCCACTGGAAAGTTCGAAATGGCTGAAGAATGCCTCAAGCATGCAATGGATTTCAGTGGCATGTTGCTGCTTTACTCTTCAATTGGAGATGCTGAGGGAATCTCAAAACTTGCAACCCTGGCTAAAGAGCAAGGAAAGAACAATGTTGCTTTCCTGTGCTTATTCACCTTGGGTAAATTGGAAGAGTGCATTCAGCTGTTGATTGATAGCAACCGAATACCTGAGGCTGCTTTGATGGCACGTTCTTATCTACCCAGCAAGGTGTCAGAAATTGTTGCATTATGGAGAAAGGATCTCAGCAAGGTAAATCCAAAGGCTGCAGAATCATTGGCAGATCCTCAGGAGTATTCTAATTTGTTCGATGATTGGCAAATAGCTCTTGCCGTTGAGTCTAAAGTTGCAGAGACAAGGGGTACTTATCCTCCTGCTGAGCAGTACTTACAATTTGCTGAGAAATCGAAAACTGATCTCGTTGAAGCTTTTAAAAGCATGCAAATAGAAGAAGATCAACCACTTGAAAATGGAGAAGCAGACCACGAAGATGAGCTCACAGAAGATAATACCGTTGAAGATGACGCCGAGCAGAATGGAGCAGAAGAGACCCAGGAAGAGGCTGTTGTTGTAGATGCTGATTCTAATGACGGTGCTGTACTTGTCAATGGTAACGAGGCTGAAGAAGAGTGGGGTACGAATAATGACGGAACACCATCAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35588.p1 GENE.S_Transcript_35588~~S_Transcript_35588.p1 ORF type:complete len:918 (+),score=195.73,Coatomer_WDAD|PF04053.10|7.7e-167,WD40|PF00400.28|3.5,WD40|PF00400.28|44,WD40|PF00400.28|0.00021,WD40|PF00400.28|0.00037,WD40|PF00400.28|5.9e-06,WD40|PF00400.28|1.1e-06,WD40|PF00400.28|1.2e+04,WD40|PF00400.28|5.1e+02,WD40|PF00400.28|1.2e+04 S_Transcript_35588:254-3007(+)
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVVIWNYQSQTMAKSFEVSELPVRSAKFIARKQWVVAGADDMFVRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKSSRRVVIGYDEGTIMVKIGREIPVASMDNSGKIIWAKHNEIQTGDIRRVGAGYEVTDGERLPLAVKELGTCDLYPQYLKHNPNGRFVVVCGDGEYIIYTAVAWRNRSFGSALEFVWSSEGEYAVRESTSKIKIFSKNFQEKKSIRPTFSAERIYGGILLAMCSNDFICFYDWADCRLIHRIDVTVKNLYWADSGDLVAIASDSSFYILKYNRDKVSAYLDSGRPVDEHGVEDAFELLYETNERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDFERANEILPTIPKEHHNSVARFLESRGMIEEALEVATDPDYRFELAIQLGRLEVAKEIATEVHSEAKWKQLGELAMSTGKFEMAEECLKHAMDFSGMLLLYSSIGDAEGISKLATLAKEQGKNNVAFLCLFTLGKLEECIQLLIDSNRIPEAALMARSYLPSKVSEIVALWRKDLSKVNPKAAESLADPQEYSNLFDDWQIALAVESKVAETRGTYPPAEQYLQFAEKSKTDLVEAFKSMQIEEDQPLENGEADHEDELTEDNTVEDDAEQNGAEETQEEAVVVDADSNDGAVLVNGNEAEEEWGTNNDGTPSA*

Click here to download the sequence:
Link to NCBI Protein BLAST