Transcript Information: S_Transcript_35589.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value3E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5359931711079
Replicate 22.2371360040837
Replicate 34.3849862016952
Condition 2: 8 Hour
Replicate 13.0571363741344
Replicate 24.6933948195231
Replicate 34.3227942695417
Condition 3: 24 Hour
Replicate 12.1386599221561
Replicate 22.8527874711486
Replicate 33.6157476245097


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35589.p1 GENE.S_Transcript_35589~~S_Transcript_35589.p1 ORF type:complete len:286 (+),score=26.03,PIF1|PF05970.10|6.5e-36,Herpes_Helicase|PF02689.10|7.1e-07 S_Transcript_35589:814-1671(+)
ATGCGGGCAAGGGAGGATCCAGAGTTCACTGCTTTTCTACTTAAACTTAGAAATGGGGATTTACAAAATTCTGAACAAGCAGCTATTATTCTCCCTAAATCCTTCTTTTCGGTGCTTCCATCAACTGAGAATTGTCTGCAGCATTTTGTAGAGTCAGTATTCCCAGATATGGTTCAACTCGCAGCTAATCCACATGCCTTTACTTCACGAGCAACGCTGACTCCAACGAATGATGAGGTTGACTGTATAAACCAGTTGGTCATACAGAAATTCCCCGGCAAAACACACACTTATAAGAGCTATGACACCACTGTCGATGATGATTGCAATGCTCATCCTGTCGAATTCTTGAACACCCTATGTCCAGGAGGCATGAGCCCACACTGTCTGACGCTCAAACTTAACTGTCCAGTCATATTGCTCCGCAATCTTAACCCCTCTGTTGGTTTATGTAACGGAACAAGACTCATTTGTCGAGACTTTAGACCAAATGTTATTATATGTGAAATCGCGACAGGGTATCATTCTGGTGAACATGTTTTCATTCCAAGAATCAGCCTCAGACCTTCATCTTCTATTACTTATCCCTACAAATTTGAGAGGAGGCAATTTCCAATCAAACTGTGCTTTGCAATGACAATAAACAAAGCTCAAGGCCAGACCCTTACCGATGTTGCTGTCTACCTTAGAAAACAGTGCTTTTCTCATGGCCAGCTATATGTTGCCCTATCACGAGCAAAGAAGGCAAACAGCGTGAAGGTCTTTGTGGAGTCACAGAAGCAAGCTCAAACAAAATCAACATCAGTCACCAATATTGTTTCATTTGATCTACTTAAAAAGGTAGGCATACGGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35589.p1 GENE.S_Transcript_35589~~S_Transcript_35589.p1 ORF type:complete len:286 (+),score=26.03,PIF1|PF05970.10|6.5e-36,Herpes_Helicase|PF02689.10|7.1e-07 S_Transcript_35589:814-1671(+)
MRAREDPEFTAFLLKLRNGDLQNSEQAAIILPKSFFSVLPSTENCLQHFVESVFPDMVQLAANPHAFTSRATLTPTNDEVDCINQLVIQKFPGKTHTYKSYDTTVDDDCNAHPVEFLNTLCPGGMSPHCLTLKLNCPVILLRNLNPSVGLCNGTRLICRDFRPNVIICEIATGYHSGEHVFIPRISLRPSSSITYPYKFERRQFPIKLCFAMTINKAQGQTLTDVAVYLRKQCFSHGQLYVALSRAKKANSVKVFVESQKQAQTKSTSVTNIVSFDLLKKVGIRW*

Click here to download the sequence:
Link to NCBI Protein BLAST