Transcript Information: S_Transcript_356004.p1


Annotated TAIR IDAT5G19730.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6670562-6673202 | Forward length=383
E-Value1.7E-208
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6929390098715
Replicate 20.22455765452941
Replicate 30.28156848982596
Condition 2: 8 Hour
Replicate 10.21705231874945
Replicate 20.056925823510755
Replicate 30.1084775959541
Condition 3: 24 Hour
Replicate 10.16675483580606
Replicate 20.11533746349286
Replicate 30.38506938023078


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_356004.p1 GENE.S_Transcript_356004~~S_Transcript_356004.p1 ORF type:5prime_partial len:393 (+),score=50.44,Pectinesterase|PF01095.15|9.8e-76 S_Transcript_356004:1-1179(+)
AAAACATTCTCCTTCTTTCTCTTTTTTCATTTTGAGCAATTAATGATGTGTAGAAAGATGTCATTCATGCTACTATTTCTCATTGTTTTGTTACATTGCTTGAACAAACAACAAATTTTATGCCATGCTAGAGCCACAAAACATAAATACAAGTTAACAGTAAACATGACACAATTTGTAGATTCAGAAGAGCAATTCATGAAGTGGGTAAAATTTGTTGGTAGTCTTAAACATAGCCTTTTCAAAACAGCCAAGAACAAAGTCTTCCCTTCTTTCTCTTTAACTGTTAGTAAAAACCCTGTAACTGGGGATTTCACCACTATCCAAGAAGCCATTGATTCTCTTCCTGCCATTAATCTTGTTCGAGTTGTCATCAAAGTCAAAGCTGGCATTTACGAGGAGAAGGTGAATATACCCCCACAAAAAGCGTTCATAACCATAGAAGGAGAAGGGGCAGATGAAACAATAGTTCAATGGGGAGACACAGCTCAAACACTAGGGCCCAATGGGAAACCCATGGGGACCTTTAATTCTGCTACCTTTGCTGTTAATTCACCTTATTTCATGGCCAAGAACATCACCTTCAAGAATACAACGCCGGTCCCACCACCAGGAGCAGTAGGAAAGCAGGCAGTGGCGTTTCGAATATCGGCAGACACGGCGGCGTTAATAGGGTGTAAGTTCTTGGGTGGGCAAGACACCCTTTATGATCATGTAGGCAGGCATTATTACAAGGACTGCTACATTGAGGGTTCTGTTGATTTCATCTTTGGCAATGGCCTTTCTCTTTTTGAGGGGTGCCATGTGCACGCAATAGCACAGAACTATGGGGCACTAACAGCACAAGGGAGGAGTAGCATGTTGGATGACACGGGGTTTTCATTCGTAAACTGTAAGGTCACGGGCTCCGGAGCTTTGTATCTTGGAAGGGCATGGGGTCCTTTTTCTACAGTCATCTTTGCCTACACTTATATGGACAACATTATCATTCCCAAAGGCTGGTACAACTGGGGTGATCCTAACCGTGAAATGACGGTGTTTTATGGACAATACAAGTGTACAGGACCAGGGGCAAATTTTGCAGGGAGGGTAGCATGGTCAAGGGAACTCACAGATGAAGAAGCCAAGCCTTTTGTTTCACTTAGCTTCATTGATGGTGCTGAATGGGTTACCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_356004.p1 GENE.S_Transcript_356004~~S_Transcript_356004.p1 ORF type:5prime_partial len:393 (+),score=50.44,Pectinesterase|PF01095.15|9.8e-76 S_Transcript_356004:1-1179(+)
KTFSFFLFFHFEQLMMCRKMSFMLLFLIVLLHCLNKQQILCHARATKHKYKLTVNMTQFVDSEEQFMKWVKFVGSLKHSLFKTAKNKVFPSFSLTVSKNPVTGDFTTIQEAIDSLPAINLVRVVIKVKAGIYEEKVNIPPQKAFITIEGEGADETIVQWGDTAQTLGPNGKPMGTFNSATFAVNSPYFMAKNITFKNTTPVPPPGAVGKQAVAFRISADTAALIGCKFLGGQDTLYDHVGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIAQNYGALTAQGRSSMLDDTGFSFVNCKVTGSGALYLGRAWGPFSTVIFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGANFAGRVAWSRELTDEEAKPFVSLSFIDGAEWVTL*

Click here to download the sequence:
Link to NCBI Protein BLAST