Transcript Information: S_Transcript_356166.p1


Annotated TAIR IDAT1G09570.1
Annotated Gene Namephytochrome A
Annotated Gene Symbol(s)PHYA, FHY2, FRE1, HY8
Annotation TypeOrtholog
Chromosome Positionchr1:3095498-3099216 | Reverse length=1122
E-Value2.8E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67803824803008
Replicate 20.56210928808955
Replicate 30.58734828291722
Condition 2: 8 Hour
Replicate 11.494135627315
Replicate 20.99747095845915
Replicate 31.2219275697123
Condition 3: 24 Hour
Replicate 10.83483631174245
Replicate 20.57742195098974
Replicate 30.96389978618278


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_356166.p1 GENE.S_Transcript_356166~~S_Transcript_356166.p1 ORF type:internal len:157 (-),score=43.90,PAS|PF00989.20|2.9e-15 S_Transcript_356166:2-469(-)
TCTAAGATCAGTGACCTCAAAATTGATGGCTTGCGAGAGCTTGAGGTAGTGACTGGTGAGATGGATGCTATTCACTCATTACAGCTTATTCTGAGGAATGCTTTTAAGAATATGGAAGCTGCAGATTTGAATACATCTGTAATCCATTCTAAGATCAGTGACCTCAAAATTGATGGCTTGCGAGAGCTTGAGGTAGTGACTGGTGAGATGGTCCGGTTGATTGAAACAGCTTCAGTACCCATTTTTGCAGTTGATGCTGATGGATTGGTTAACGGTTGGAATTCAAAGATTTCTGAGCTGACTGGTCTTCCAGTTGTAGAAGCTGTTGGAAAGCATATCGCCACGCTTGTTGAGGACTCTTCAATTGATACCGTCCAAAATATGTTGCACTTGGCACTTCAAGGAAAAGAGGAGAAGAACATTCAATTCGAGGTCAAAAGGCATCAGTCAATGGGAGACACAAGTCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_356166.p1 GENE.S_Transcript_356166~~S_Transcript_356166.p1 ORF type:internal len:157 (-),score=43.90,PAS|PF00989.20|2.9e-15 S_Transcript_356166:2-469(-)
SKISDLKIDGLRELEVVTGEMDAIHSLQLILRNAFKNMEAADLNTSVIHSKISDLKIDGLRELEVVTGEMVRLIETASVPIFAVDADGLVNGWNSKISELTGLPVVEAVGKHIATLVEDSSIDTVQNMLHLALQGKEEKNIQFEVKRHQSMGDTSP

Click here to download the sequence:
Link to NCBI Protein BLAST