Transcript Information: S_Transcript_356171.p1


Annotated TAIR IDAT2G45350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR4
Annotation TypeOrtholog
Chromosome Positionchr2:18694816-18696657 | Reverse length=613
E-Value2.4E-260
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6265141500304
Replicate 25.1752222418862
Replicate 35.919890594736
Condition 2: 8 Hour
Replicate 111.353795770696
Replicate 214.293125519825
Replicate 313.717142671724
Condition 3: 24 Hour
Replicate 16.8770929507426
Replicate 26.7851534657583
Replicate 36.6168943655397


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_356171.p1 GENE.S_Transcript_356171~~S_Transcript_356171.p1 ORF type:complete len:648 (-),score=114.70,PPR|PF01535.16|7.6e+03,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|3,PPR|PF01535.16|0.00054,PPR|PF01535.16|1e-07,PPR|PF01535.16|0.00026,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.0002,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.0035,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|0.54,PPR|PF01535.16|0.0018,PPR|PF01535.16|2.7e+03,PPR_2|PF13041.2|0.025,PPR_2|PF13041.2|0.034,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|4.7e-07,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|9.4e-08,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|0.019,PPR_1|PF12854.3|6.4e+03,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|0.036,PPR_1|PF12854.3|2.4e-06,PPR_1|PF12854.3|3.4e-06,PPR_1|PF12854.3|0.5,PPR_1|PF12854.3|65,PPR_1|PF12854.3|0.46,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|42,PPR_1|PF12854.3|0.0095,PPR_1|PF12854.3|1.3e+03,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|0.095,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|72,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|9.5,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|28 S_Transcript_356171:45-1988(-)
ATGTTACTCACCACAAATCTAACACAACCATGGAGCTCAACCATACCCATTCTTTCTCACATTCAACACTGCAAAACCTTAAACGACATCAAACAAATCCATGGCCGCCTTGTCACCACTGGTTTTATTCACAATACTTACCTTACCACTAAAATTATCATCAACTTCTCTTCTTCCCAATACACACCCCTTATCCAATTTGCTCGCTTTCTCTTGCTATCCCAACACGCAACTATCCCATCTGATCAATCCCACTTTGACCCTTTTCTTTTTAATGCCGTCATTAAGTCCTTTGCTCTTGGTATTGGCAATAGTGACCCAAAACAAGCTCTTTTGATTCTCTGTTTCATGCTTCATAATGGTATTTGTGGTGATAAGTACTCCTTTTCTTTGGTTCTTAAAGCTTGTTCTCGACTTGGGTTGCTTAAAGAAGGTATTCAAGTTCATGGGTTGCTGACAAAATTGGATCTTGGGTCGGAATTGTACTTGCAAAATTGTCTCATTTCTTTGTATGTGAGGTGTGGGTGTGTTGAGCTTGCCCGCCAAGTGTTCGATAGAATGCCGAACAGAGATTCTGTTTCTTATAATGCAATGATTGATGGCTATGTTAAATCCGGGTTTGTGAGTCTTGCTAGGGAATTGTTTGATCGAATGCCGGTTGAGGAGAGGAATTTGATATCTTGGAATTCGATGATTGGTGGGTATGTGCAATCAGAAGATGAGCTTGATAAAGCCTGGAAGTTGTTTGAGGAAATGCCGAAGAGGGATTTGGTTACGTGGAATTTGATGATCGATGGGCTTGCGAAATGCAAGAAGATGGAAGTTGCTTGCCATTTGTTTGATCAAATGCCTAATAGGGATGTGATCACTTGGGCTACAATGATAGACGGATATGCAAAGATGGGTAATGTTGAAATTGCTAGAAATTTGTTTGATCAAGTCTCTGGGAAAGACATTGTGGTTTGTAATGCCATGATGGCTGGTTATGTTCAAAATGGGCGTTTTGTAGAAGCACTGGATTTCTTCGATGGTGTTTTTGAGGCGGGGAATTCATCGCCTGATAAGACTACCCTATCAATTGTTCTTTCGGCCATTGCTCAATTGGGGCGCATTGATGAGGGCATTGCGATGCATTCCTATATTCAGGCTAATAGAATCACCATCGATGGGAAACTTGGTGTGGCTCTTATAGACATGTATTCAAAATGTGGCAGCATTGATAAGGCTATTCGTGTTTTTGAAAATTTGAAAGGGAGGAATGTTGACCATTGGAATGCCATGATAGGAGGGCTAGCCATTCACGGTTTGGGTGAATTGGCTTTTGAGCTTTTCATGGAGATGGAGACGCTCTTTGTGAAGCCGGATGATATTACATTCATTGGGTTGCTAAATGCTTGTGGTCATGCAGGTCTAGTGAAAGAAGGGCAAATATGTTTCGAGCTGATGAGGAGAGTTCACAAATTGGAGCCAAAACTTCAGCACTATGGATGCATGGTTGACATCCTGGGAAAAGCTGGGCATCTAGAAGAAGCAAAAAAATTTATAGACGAGATGCCTATTGAGCCAAATGACATAATTTGGAGGACTTTACTTAGTGCTTGCATAAATCATGAAAACTTCTATCTTGGGCAACAGGTTGCTGAGCATCTTATTAGGTTTGATTATAGTTATCCAGGTTCTTATGTGCTTCTCTCCAATATGTATGCTACCTTTGGTGTGTGGAGTGATGTTAGTAGGATCAGGGCCATGATGGAGGACAAAGATGTGAAGAAACTTCCCGGTTGCAGTTCTATTGAACTCACTGGAGTTGTCCATGAATTCTTGGTTAGAGACAAAGCCCATCCTCATGCTGGAGAGGTCTATTCTCTATTGAACAACTTCCATGCGTCAGAGTTGAGCTCGATTCCAGATTCTGAATTTATAGAGCTGGAAGTGGTAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_356171.p1 GENE.S_Transcript_356171~~S_Transcript_356171.p1 ORF type:complete len:648 (-),score=114.70,PPR|PF01535.16|7.6e+03,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|3,PPR|PF01535.16|0.00054,PPR|PF01535.16|1e-07,PPR|PF01535.16|0.00026,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.0002,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.0035,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|0.54,PPR|PF01535.16|0.0018,PPR|PF01535.16|2.7e+03,PPR_2|PF13041.2|0.025,PPR_2|PF13041.2|0.034,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|4.7e-07,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|9.4e-08,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|0.019,PPR_1|PF12854.3|6.4e+03,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|0.036,PPR_1|PF12854.3|2.4e-06,PPR_1|PF12854.3|3.4e-06,PPR_1|PF12854.3|0.5,PPR_1|PF12854.3|65,PPR_1|PF12854.3|0.46,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|42,PPR_1|PF12854.3|0.0095,PPR_1|PF12854.3|1.3e+03,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|0.095,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|72,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|0.65,PPR_3|PF13812.2|9.5,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|28 S_Transcript_356171:45-1988(-)
MLLTTNLTQPWSSTIPILSHIQHCKTLNDIKQIHGRLVTTGFIHNTYLTTKIIINFSSSQYTPLIQFARFLLLSQHATIPSDQSHFDPFLFNAVIKSFALGIGNSDPKQALLILCFMLHNGICGDKYSFSLVLKACSRLGLLKEGIQVHGLLTKLDLGSELYLQNCLISLYVRCGCVELARQVFDRMPNRDSVSYNAMIDGYVKSGFVSLARELFDRMPVEERNLISWNSMIGGYVQSEDELDKAWKLFEEMPKRDLVTWNLMIDGLAKCKKMEVACHLFDQMPNRDVITWATMIDGYAKMGNVEIARNLFDQVSGKDIVVCNAMMAGYVQNGRFVEALDFFDGVFEAGNSSPDKTTLSIVLSAIAQLGRIDEGIAMHSYIQANRITIDGKLGVALIDMYSKCGSIDKAIRVFENLKGRNVDHWNAMIGGLAIHGLGELAFELFMEMETLFVKPDDITFIGLLNACGHAGLVKEGQICFELMRRVHKLEPKLQHYGCMVDILGKAGHLEEAKKFIDEMPIEPNDIIWRTLLSACINHENFYLGQQVAEHLIRFDYSYPGSYVLLSNMYATFGVWSDVSRIRAMMEDKDVKKLPGCSSIELTGVVHEFLVRDKAHPHAGEVYSLLNNFHASELSSIPDSEFIELEVVS*

Click here to download the sequence:
Link to NCBI Protein BLAST