Transcript Information: S_Transcript_356212.p3


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeHomolog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value5E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72912332151179
Replicate 22.720069945447
Replicate 30.25264022032329
Condition 2: 8 Hour
Replicate 10.29212863448127
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 21.3970842752543
Replicate 30.34550745760433


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_356212.p3 GENE.S_Transcript_356212~~S_Transcript_356212.p3 ORF type:internal len:146 (+),score=-1.07,Chloroa_b-bind|PF00504.17|6.1e-06 S_Transcript_356212:2-436(+)
CAGTCCGTTGTTTGTACCAATTCGTTCTCGAGCAGTACGGGAGAGTTTGGCACGATGCCGCCAAAGAGTGCAACCAAGAAGATCTCGAATGCAGCCAAGACTGCAGCCAAAAAGGCGCCCAAGCCGCCCAAGCCTGGTGCAGCGGCCAAGAGGGGAGCGAAGCAGGCGCCGCGGCCAGTGAAGAAGGCAGCGAGCGCAGCCAAAGCTGCGACAAGCGGCAGCCGCTCCACCAAGGGCTGGACCGGCGGTGCCGGCGGGTCCTCAACAGACTTGAGCAAGTGGCATGGCCCCAACCGCAACCTGTACCTGCCCGACGGCCTGCTCGACTGCAGCGCGCTGCCCAACTACCTCGACGGCACCCTGCCCGGCGACTACGGCTACGACCCCCTCGGCCTCGGCGCCGGCGGCAACGTCGAGAAGTACCGCAACGCGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_356212.p3 GENE.S_Transcript_356212~~S_Transcript_356212.p3 ORF type:internal len:146 (+),score=-1.07,Chloroa_b-bind|PF00504.17|6.1e-06 S_Transcript_356212:2-436(+)
QSVVCTNSFSSSTGEFGTMPPKSATKKISNAAKTAAKKAPKPPKPGAAAKRGAKQAPRPVKKAASAAKAATSGSRSTKGWTGGAGGSSTDLSKWHGPNRNLYLPDGLLDCSALPNYLDGTLPGDYGYDPLGLGAGGNVEKYRNAE

Click here to download the sequence:
Link to NCBI Protein BLAST