Transcript Information: S_Transcript_356693.p1


Annotated TAIR IDAT5G13770.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4445461-4447290 | Forward length=609
E-Value1.1E-187
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.507996815859
Replicate 241.825193473962
Replicate 348.073482682371
Condition 2: 8 Hour
Replicate 116.238290889191
Replicate 214.843880614037
Replicate 317.308602952544
Condition 3: 24 Hour
Replicate 160.220097458273
Replicate 248.012908884489
Replicate 356.659948094905


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_356693.p1 GENE.S_Transcript_356693~~S_Transcript_356693.p1 ORF type:complete len:633 (+),score=136.74,PPR_2|PF13041.2|40,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|0.59,PPR_2|PF13041.2|3.5e-08,PPR_2|PF13041.2|5,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|7.5e-06,PPR_2|PF13041.2|1.9e-13,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|0.0062,PPR_2|PF13041.2|0.68,PPR|PF01535.16|7.1e+03,PPR|PF01535.16|54,PPR|PF01535.16|0.093,PPR|PF01535.16|0.0001,PPR|PF01535.16|9.8e+02,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|71,PPR|PF01535.16|4.5e-05,PPR|PF01535.16|7.1e-08,PPR|PF01535.16|0.00041,PPR|PF01535.16|0.00039,PPR|PF01535.16|20,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|5.9,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|0.0032,PPR_3|PF13812.2|9.6e-05,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.0041,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|6.5e+02,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.88,PPR_1|PF12854.3|9.1e+02,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|0.00098,PPR_1|PF12854.3|0.13 S_Transcript_356693:227-2125(+)
ATGGCAATTCCTACATCTTCAGGATTTTCACCACCTAATTGTTGCCACCCACTTCAACATTCCCACAAATTCACAATCTTCAAATCTTTCCAACACATTTTTTCACATAATCAAAGTGCAAATACTAAGTTCATAATAGCTCATTCCTCTGCTTGTCCACCACCTGTACTTGAAGAAGAACCAATACCATCATCCCCTGTTGTTTCTCTTGTTGAGTTCACCTATGGAGTTCCAAATTCTAAGTACTCAAATTCTTCATCTGAAGAGAAAAACATCAACAAACTTGTTAGAGACATGCTTGGTGATCCTAGAACTGAAGATCTTGCATTGGAGTATTACATCAAGGCTAAACAAAGCTCAGAGTTTCTACCTCAGAAAACCACTTTCAAGGATTTGTTGAGGTACTTGTTAAGATCAAAGAAATGGGATTTAGTTTCCATGATTTCTAGAGATATGAAAGCTTACCAAGTTTTCCCTGATGCTACCTTTTGTGCTAGAATTGTTAGTGCTTGCATTAGAGCTAGGAAGTTCAGAATTGCTGATATTCTCCTTGAGAGCTTTGAGAATGATCCTAAGATTGCTGGTTTTGCTTATGTTTCTGCCTTTAAGAGTTACAATAAGCTTCATATGTATAAAATTTCGGTTGATTTGTATAATAAAATGAAATCAGCTGAAGTTGTGTTGGATCCTGGGGGGTATAGTTTCATCATGGAAGCTTATATGAAGGTGGGTAATTCCAAGAAAGTCATTGAATTATTCAAGGAACTTGAAGCTAGTGAAAAGATAGATTCTCTAGAGAATCCAACAGAAGTTTATGGGTTGTACTTGGATGCTTTGGGGAAGTCAGGGGAAGGGTTTAAAGCTCTTGAGCTATTTGAGCAAATGCAAGAAAAGGGCATTCCCCCTAATGCCTGGATTTATGCTTCCTTGATCAGCTCATTAGCCGACATGAGAGAAGTTAATATCGTCGAAAAAATTGTTGAACAAGCTGAATCCAAGCAAATGCTGAAGGACCCAGCAATATTCTTGAAGCTAGTGATCATGTATGTCGACCAAGGCTTGATGGAAAGGACTCCAGATGTTGTAAAGACTATGAAATCGGCTAATTTGAAGGTCTCGGATTGTATATTTTGTGCTATTGTTAATGGTTATGCTAAGAAGAGAGGCCTCAAAGCAGCAGCTAGAGTCTACCAAGGGCTAACATCGCAAGGGTTCGAGCCAGGGCAAGTGACCTATGCATCTATCATTAATGTCTACTTTCGCCTTGCATCATTTTCAAAGGCCAAGAAGATTTTTGATGAGATGCAAGAAAGGGGGTTTGAGCGATGTGTTGTGGCATACTCGACTATGATTGTGATGTATGGTAAGACGGGTCAATTGAGAGAAGCAATGAAGCTACTAGCGAAAATGAAGGAGAAAGGGTGCGAGCCTAATGTTTGGGTCTACAACGCGCTTATTGACTTACACGGAAGGGCCATGGATTTGAGGCAAGTTGACAAGATATGGAAGGAGATGAAAAGGCGGAGAGTGAAGCCTGATCGAGTGAGCTACACTAGCATCATATCAGCTTATTCCAAGTCGCGTGATTTTGAAGCTTGCACCAAATTTTATGAAGAGTATCGACAAAATGGAGGGGGGATTGATGTAGCCATGGCCGGGATTATGGTGGGTGTTTTCTCGAAGATCAATAGAGTCGATGAATTGGTTAAGCTCTTGAGGGATTTGAAGGCTGAGGGGACTAAATTGGATGCAAGACTATACAGGTCTGCCTTAAATGCTCTTAGAGATGCTGGGCTTCAAGTGCAAGCAAGATGGTTGCAGGAGAGTTTTGAGAGGACTTCAGTTGAGCCCTTGAATCCTAACAATGGGAGGCCTAGAAAAAGACCAGTTTTTATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_356693.p1 GENE.S_Transcript_356693~~S_Transcript_356693.p1 ORF type:complete len:633 (+),score=136.74,PPR_2|PF13041.2|40,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|0.59,PPR_2|PF13041.2|3.5e-08,PPR_2|PF13041.2|5,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|7.5e-06,PPR_2|PF13041.2|1.9e-13,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|0.0062,PPR_2|PF13041.2|0.68,PPR|PF01535.16|7.1e+03,PPR|PF01535.16|54,PPR|PF01535.16|0.093,PPR|PF01535.16|0.0001,PPR|PF01535.16|9.8e+02,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|71,PPR|PF01535.16|4.5e-05,PPR|PF01535.16|7.1e-08,PPR|PF01535.16|0.00041,PPR|PF01535.16|0.00039,PPR|PF01535.16|20,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|5.9,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|0.0032,PPR_3|PF13812.2|9.6e-05,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|0.0041,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|6.5e+02,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.88,PPR_1|PF12854.3|9.1e+02,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|0.00098,PPR_1|PF12854.3|0.13 S_Transcript_356693:227-2125(+)
MAIPTSSGFSPPNCCHPLQHSHKFTIFKSFQHIFSHNQSANTKFIIAHSSACPPPVLEEEPIPSSPVVSLVEFTYGVPNSKYSNSSSEEKNINKLVRDMLGDPRTEDLALEYYIKAKQSSEFLPQKTTFKDLLRYLLRSKKWDLVSMISRDMKAYQVFPDATFCARIVSACIRARKFRIADILLESFENDPKIAGFAYVSAFKSYNKLHMYKISVDLYNKMKSAEVVLDPGGYSFIMEAYMKVGNSKKVIELFKELEASEKIDSLENPTEVYGLYLDALGKSGEGFKALELFEQMQEKGIPPNAWIYASLISSLADMREVNIVEKIVEQAESKQMLKDPAIFLKLVIMYVDQGLMERTPDVVKTMKSANLKVSDCIFCAIVNGYAKKRGLKAAARVYQGLTSQGFEPGQVTYASIINVYFRLASFSKAKKIFDEMQERGFERCVVAYSTMIVMYGKTGQLREAMKLLAKMKEKGCEPNVWVYNALIDLHGRAMDLRQVDKIWKEMKRRRVKPDRVSYTSIISAYSKSRDFEACTKFYEEYRQNGGGIDVAMAGIMVGVFSKINRVDELVKLLRDLKAEGTKLDARLYRSALNALRDAGLQVQARWLQESFERTSVEPLNPNNGRPRKRPVFI*

Click here to download the sequence:
Link to NCBI Protein BLAST