Transcript Information: S_Transcript_356855.p1


Annotated TAIR IDAT3G19840.1
Annotated Gene Namepre-mRNA-processing protein 40C
Annotated Gene Symbol(s)ATPRP40C, PRP40C
Annotation TypeOrtholog
Chromosome Positionchr3:6891228-6897227 | Forward length=835
E-Value6.8E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3105565380926
Replicate 24.6611527234186
Replicate 33.5067174243466
Condition 2: 8 Hour
Replicate 14.3551853464567
Replicate 22.6783199075729
Replicate 34.3532364827075
Condition 3: 24 Hour
Replicate 12.9229069459246
Replicate 24.3093162856435
Replicate 33.9076406824828


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_356855.p1 GENE.S_Transcript_356855~~S_Transcript_356855.p1 ORF type:3prime_partial len:142 (-),score=37.52,FF|PF01846.15|2.6e-07,FF|PF01846.15|5.3e-06,RhoGAP-FF1|PF16512.1|4.4e-05,RhoGAP-FF1|PF16512.1|1.6e+02 S_Transcript_356855:1-423(-)
ATGGAGAGGGTACGGTTGAAAGTTCTTAGGAAGGAAGCAGTTGCTTCTTATCAAGCATTACTAGTGGAAACAATAAAAGATCCTCAGGCATCTTGGACAGAGTCAAAGCCTAAACTTGAGAAAGATCCACAAGGGCGTGCATCCAATCCTGATCTGGATGGAGCTGACTTGGAGAAGCTCTTTCGAGAACATGTGAAAATGCTCTATGAGAGGTGCGCTCATGAGTTCAGAACTCTCTTGTCGGAGGTTATAACTCTTGAAGCAGCAATTAAAGAGACTGAAGATAGGAAAACAGCTCTTAGTTCATGGTCTACAGCCAAAAGGCTCCTTAAATCTGATCCTAGGTATACAAAAATGCCTAGAAAAGATAGAGAAGCCCTCTGGAAGAGGCATGCTGAGGAAATGCAGCGCAAGCAACAGGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_356855.p1 GENE.S_Transcript_356855~~S_Transcript_356855.p1 ORF type:3prime_partial len:142 (-),score=37.52,FF|PF01846.15|2.6e-07,FF|PF01846.15|5.3e-06,RhoGAP-FF1|PF16512.1|4.4e-05,RhoGAP-FF1|PF16512.1|1.6e+02 S_Transcript_356855:1-423(-)
MERVRLKVLRKEAVASYQALLVETIKDPQASWTESKPKLEKDPQGRASNPDLDGADLEKLFREHVKMLYERCAHEFRTLLSEVITLEAAIKETEDRKTALSSWSTAKRLLKSDPRYTKMPRKDREALWKRHAEEMQRKQQA

Click here to download the sequence:
Link to NCBI Protein BLAST