Transcript Information: S_Transcript_357190.p1


Annotated TAIR IDAT4G38430.1
Annotated Gene Namerho guanyl-nucleotide exchange factor 1
Annotated Gene Symbol(s)ATROPGEF1, ROPGEF1
Annotation TypeOrtholog
Chromosome Positionchr4:17986643-17988659 | Forward length=548
E-Value9.9E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4423403566431
Replicate 25.658755823109
Replicate 34.3050767226849
Condition 2: 8 Hour
Replicate 16.2071020807793
Replicate 27.8011345400776
Replicate 37.1257588535384
Condition 3: 24 Hour
Replicate 13.2106312911248
Replicate 24.4413233060277
Replicate 33.7069863534897


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_357190.p1 GENE.S_Transcript_357190~~S_Transcript_357190.p1 ORF type:internal len:347 (-),score=72.37,PRONE|PF03759.9|5.9e-139 S_Transcript_357190:3-1040(-)
TGCAGAGAAATGGAGTGGCTCTTATGTGTTAGCGATTCAATTGTGGAACTGGTCCCTTCCGTGCAAGAGTTTCCTGGTGGAGGCACCTTCGAGGTCATGGCCACCAGGCCTAGATCTGATTTGTATGTAAACCTCCCTGCCCTTAAGAAACTTGACACCATGCTGCTTAGTTTGCTTGATGGCTTCCGAGATACTGAGTTCTGGTATGCAGACCGTGAGGGTATTGATCGCGACCCTCTTCAAGCAGCTATTTGCTCTGGTCGCCCCTCTGTTCGTCAGGAGGATAAGTGGTGGTTGCCTTGTCCTAAAGTTCCTCCCAATGGCTTGTCTGACGAGGCACGCAAGAGGTTGCAACAATGTAGGGACTGTACAAACCAGATTCTAAAGGCTGCTATGGCTATTAATAATAGTGTTATTGCTGAGATGGAGATTCCTTGCACATATCTGGAGACCTTGCCCAAGAATGGAAGGGATTGTTTGGGAGAGATCATATACCGCTACATAACTGCGGAGCAATTCTCACCTGAGTGTCTTCTTGATTGCCTAGACTTGTCTTCAGAGCATCACATTCTAGAAGTAGCAAATAGGATTGAATCAGCGGTGCATGTATGGAGAAAGAAAGATCAAAAGAAGCATCCAACAAACTCAAGAAGCAAACGATCATCCTGGGGTGGTAAAGTTAAAGGCCTTGTCACTGACAATGAAAAGAATCAAGTTCTTGCACGGCGTGCTGAGACGCTATTGAGGAGTCTTAAGATTCGGTTTCCTGTCCTGCCACAGACTGCGCTTGATATGAGCAAGATTCAATATAACAAGGATGTTGGGCAAGCCATACTTGAAAGCTATTCAAGAGTGATGGAAAGCTTGGCTTTCAACATTATGGCGAGGATTGATGATTTGTTATTTGTTGATGATGCCACCAAGCAATCGGCATCAGAATCGAAGTCTCTTTTCTGCAGAGGGGGTTTCGGTGGTCTGCCAATCCAAAAGCGGATGTCGCCCAGCCCCTTCTCCATTCAACACTCCCCTTATGGCTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_357190.p1 GENE.S_Transcript_357190~~S_Transcript_357190.p1 ORF type:internal len:347 (-),score=72.37,PRONE|PF03759.9|5.9e-139 S_Transcript_357190:3-1040(-)
CREMEWLLCVSDSIVELVPSVQEFPGGGTFEVMATRPRSDLYVNLPALKKLDTMLLSLLDGFRDTEFWYADREGIDRDPLQAAICSGRPSVRQEDKWWLPCPKVPPNGLSDEARKRLQQCRDCTNQILKAAMAINNSVIAEMEIPCTYLETLPKNGRDCLGEIIYRYITAEQFSPECLLDCLDLSSEHHILEVANRIESAVHVWRKKDQKKHPTNSRSKRSSWGGKVKGLVTDNEKNQVLARRAETLLRSLKIRFPVLPQTALDMSKIQYNKDVGQAILESYSRVMESLAFNIMARIDDLLFVDDATKQSASESKSLFCRGGFGGLPIQKRMSPSPFSIQHSPYGS

Click here to download the sequence:
Link to NCBI Protein BLAST