Transcript Information: S_Transcript_357699.p1


Annotated TAIR IDAT5G11620.1
Annotated Gene NameSWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3739076-3740127 | Reverse length=273
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4158281442997
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.34956013499573
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.53118308382064
Replicate 30.39409444382994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_357699.p1 GENE.S_Transcript_357699~~S_Transcript_357699.p1 ORF type:5prime_partial len:128 (+),score=26.53,zf-RING_2|PF13639.2|7.3e+03,zf-RING_2|PF13639.2|5.2e-08 S_Transcript_357699:2-385(+)
TCCCTTGCAGGGCCTTCCCTTCGCGAGAGGTTCCACCAGCTATTTTTGCTCCAAAGGGAACTCGGAGGGACATGCCACACCCCGTGTAGGGGTGTGGATGAAGGTTCCTTGTGTCCTATATGCCTCGACGAGATGGGGAAGGCAGGGGACAGGCTAGTTGCCTGTGGCACATGTCGAAACACTTTGCATGAAGAATGCTTGTTAACTTGGAAAAGAACTCAATTGAGAAGATCAGTTAGCTGTGTGATTTGTAGGTCAAGGTGGAGAGACAGGGCTGATCAAGAAAGGTATATCAATCTAGCTGCTTATATCAGTGAAGATGATTTGGCTTCTCCTCCTACAAATGGTGCTGCTGATCAAGGGACTACTTGTAGTGATGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_357699.p1 GENE.S_Transcript_357699~~S_Transcript_357699.p1 ORF type:5prime_partial len:128 (+),score=26.53,zf-RING_2|PF13639.2|7.3e+03,zf-RING_2|PF13639.2|5.2e-08 S_Transcript_357699:2-385(+)
SLAGPSLRERFHQLFLLQRELGGTCHTPCRGVDEGSLCPICLDEMGKAGDRLVACGTCRNTLHEECLLTWKRTQLRRSVSCVICRSRWRDRADQERYINLAAYISEDDLASPPTNGAADQGTTCSDE*

Click here to download the sequence:
Link to NCBI Protein BLAST