Transcript Information: S_Transcript_35772.p1


Annotated TAIR IDAT5G55060.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in 80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22342079-22346400 | Forward length=662
E-Value1.3E-236
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9209098039765
Replicate 26.4983791081761
Replicate 37.4724878959416
Condition 2: 8 Hour
Replicate 18.8242994415723
Replicate 29.9966162743606
Replicate 38.605967208333
Condition 3: 24 Hour
Replicate 17.8465817135755
Replicate 27.4243520681138
Replicate 36.6316582272073


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35772.p1 GENE.S_Transcript_35772~~S_Transcript_35772.p1 ORF type:complete len:696 (+),score=150.43,Rab3-GTPase_cat|PF13890.2|8.5e-55 S_Transcript_35772:254-2341(+)
ATGGAGGGAGAGTCGATAGTTTCCAAGGCAAGGACGGCATTTCATTCAGCGGCTGCTAAAGCCGAAAGAGTTTTCATCGATTTTAAATCCGATCTTCGAGATTCAGATGAGCATCCTTGGAAGGGAGGTGGTTCAGGTGCAGGTCAATTTGAGAGTGTGTTGCCTTCTGAGACTGAACAAAAGAGTTCAAATGAGCCGAAGCAATTTCGGTGGAAGCCACCGAGCATAGGGACAAAGCAGGAATGGCACGAGAGACTACGGAATATTGGAAAAGGTAGAAAGGGAACTGAAGACGCAGAGAAGGTTGAGATTCCAAAGATGTCCTTCCCAATATATGATGAAAATTTATACCTATATAATGAAAAATGTGCTCTTGAGGCAAAGGGTTGTGATACAACTTCGCCTACAGATAATTCTGACGCAACCAATAAAGATACTATCCCACCTGTATCGGTGTTGAAGCAACTGGCAATTGCCATCGAATCAGAAAGGAATTACCGGACAGTGAAGGAATTTCTCACATCATCTAAAAGTTCTTCACCTGTTCGTGAAAGGGCAAGCTTGGGCATCTCTGCAGTCAAGTCATTAGTGCTCCGGGGGAAGGAGGAAAAAGTTACCTCCGAGTTGGGTGATGATGAAGTTTGGTCTTTTATCCAGTCTATACTTGATGCTGAGGGACTTACTCCTAGTAGGAAGGTTGGCTTTCTTGTGGAAACACTTCCTGGCTCAATAACTTTGCCGAGGGACATTCATGGTGCTCCAGCTGAAAGCTTGGTTGTTAAAGTATCTGAAGTCATTGGAAGCTTCAAAACGCTGCAGAAGATGGCTATATTTTGGTGCAGATTTGTTGCTGAAATCAGAAGACTTTGGTTGGAAGAGCAATATGTAGCTGGCATTCCCGTCGAGGAATTACCGGATTTAAATTGCTGTCTACTGTATCAGCAGTTCCAACTTATAAATTGTTGTGTTTCTCGGAAGAAGCGCCGTGCCATAGCTACCGATTCACTAGAATCTTTAATTAGAGAAGCTGGTTGTGATGCTGACGGAGTGCCTTCATCGATAGGAAGAATAACTTCAGGTTCTTTTCCTCATGCTAAAACACTCACAGGGGAAGTTGTTCTACGGTTAGGAGCAAGTCAGCAGGCTGAAAATATGACTTTGTTGGAAACTGGAGAGCCCATATATGCTCCTGTGACACAGGAAGGACCCTTACTCACAGAAGATCTTGCCCGAGAAGCTGAAGAATTTGTGCTGCGGACAGGAAGTGTTGGTGCTGGTTGTTCCCAACTTCTTTCTGACATGCAGGCTTTTAAGGCAGCAAATCCTGGATGTATTCTTGAAGACTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGAGCTCGAGAATGACAATGATTCTGATGTAAGTTCTGGAGGAGGTGATTCAACTTCTTCAAGAGGTCGATTAAGTTCCCGTATGCGCAAAGCAGGTAATTTGTGGCGTGAACTCTGGGAGACTGCAAAACCTGTCCCTGCTGTGAGACAAGCACCCCTATTTGACGAGGACTTGGCAGTGGAAGGTGTATTCCATATATTAGAAGAAATATCTCCTTCTCAGCTATTCAGTCAGCTTTTCCTGTCTCTGCTTGGCTTTGGATTTGTGATTGCCGAGGCTAAGCTCTCCACAGATGAGAACATAGTAAAACTGTTCTACGAATGTAAAGATTATGTAGTTGCGTCATGTCAAGGCCAGTCCTGGATGGAGAAAATTGATGATCTTTGTCAGATTTATGAAACAGTGGAAGTAATGTTTGTCCGCCCAGAGGATGTCATGAAGATGATGAAGCAACCTGAAGATGCAAATACCTCTGAGGAGCCTAAACATCGGTTTAAGAAGTTAACCCAAATATTTGGCCGCAAAAATAAGTCAAAAAAATCGACCTCAGAGGAGCAGAACACAGAAGATAATCAAACCCGTCAGCCATTTTCAAATTTTTTTGATAGCAAGTCATCCTTGTTCGCAAAGAAGCCCCCTAAGCCTGAAAGCACAACACTCCAAGCCAACAAGCCCCCTAGTCTAGATGAAAATGAATGGACAGTTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35772.p1 GENE.S_Transcript_35772~~S_Transcript_35772.p1 ORF type:complete len:696 (+),score=150.43,Rab3-GTPase_cat|PF13890.2|8.5e-55 S_Transcript_35772:254-2341(+)
MEGESIVSKARTAFHSAAAKAERVFIDFKSDLRDSDEHPWKGGGSGAGQFESVLPSETEQKSSNEPKQFRWKPPSIGTKQEWHERLRNIGKGRKGTEDAEKVEIPKMSFPIYDENLYLYNEKCALEAKGCDTTSPTDNSDATNKDTIPPVSVLKQLAIAIESERNYRTVKEFLTSSKSSSPVRERASLGISAVKSLVLRGKEEKVTSELGDDEVWSFIQSILDAEGLTPSRKVGFLVETLPGSITLPRDIHGAPAESLVVKVSEVIGSFKTLQKMAIFWCRFVAEIRRLWLEEQYVAGIPVEELPDLNCCLLYQQFQLINCCVSRKKRRAIATDSLESLIREAGCDADGVPSSIGRITSGSFPHAKTLTGEVVLRLGASQQAENMTLLETGEPIYAPVTQEGPLLTEDLAREAEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTELENDNDSDVSSGGGDSTSSRGRLSSRMRKAGNLWRELWETAKPVPAVRQAPLFDEDLAVEGVFHILEEISPSQLFSQLFLSLLGFGFVIAEAKLSTDENIVKLFYECKDYVVASCQGQSWMEKIDDLCQIYETVEVMFVRPEDVMKMMKQPEDANTSEEPKHRFKKLTQIFGRKNKSKKSTSEEQNTEDNQTRQPFSNFFDSKSSLFAKKPPKPESTTLQANKPPSLDENEWTVV*

Click here to download the sequence:
Link to NCBI Protein BLAST