Transcript Information: S_Transcript_35787.p1


Annotated TAIR IDAT5G60580.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24354298-24356706 | Forward length=494
E-Value3E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4456784741783
Replicate 29.1676431494696
Replicate 39.0529412282514
Condition 2: 8 Hour
Replicate 112.366778859707
Replicate 211.645619839858
Replicate 314.113232432522
Condition 3: 24 Hour
Replicate 17.2816278301981
Replicate 28.3825056515257
Replicate 37.5435794910279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35787.p1 GENE.S_Transcript_35787~~S_Transcript_35787.p1 ORF type:complete len:438 (+),score=83.52,RINGv|PF12906.3|1.3e-11 S_Transcript_35787:187-1500(+)
ATGGGGACTGAAGGAGGATCAGTTCGGGAGGAGGAGAATGGTAATCAGCAGATAGAGTCAACTGAAATTATTGAAGAAATTTCACCTGGAAATTGGCGAAGACCTCAAAATCTCGTCCTAGAGATACCATCAAGAGGTGCTGAATGCTCCCCAGAAGATGCTGTGACCATAAACATTCTTCCCACACCAAGCCCAACACCCAAACGAGTAAATTTTTCTCCGATTCATGGTCCTAGCACTGCAAGGTTAAACAGGTCTCGAAGCTCTTCCTTTCTCAAGGACAAGTCCTCATTTAAAAGCCTCCTTCCGAAACTTAGTTTCAAATTCAAAAATTCTTCTTCAGAAATTGAGAAGGCAGCGGTTATTGCTCTAGGATCTCCATCATCAGGGAGAGGGGACAGGCCACGATTTGCAAGGACATTTTCCTTAACAAAGGTTTTCACACCAAAGGGAAATAAAGCATCATCTGTGCCTGTTACTCCAATTTCTCACTCTAATCCAGGTTCCGCACATGGAGGCTATAGAGGAAGAGTACAATTTGGCATACATCGTTCGCTTTCTGTTCCAGATCTCTACAAAGATGGGAGCACACATCAGGTAGATTCATTTGGTGGATTGTTTCGTGTAATACCAACAACTCCACGTGCTAGAGAGGGAATACTGAAAGCTTCCGATTCAAGCATAGCAGTGCCTGATGATAAAGACGATGGTGGTGAGGACATCGCGGAAGAAGAAGCTGTTTGTAGAATATGCTATGTTGAACTTGGGGAAGGCTCAGAGACATTGAAGATGGAATGTAGTTGCAAAGGCGATCTTGCTTTAGCTCACCAAGAATGTGCTGTCAAATGGTTTAGCATTAAAGGGAATAAGATTTGTGAAGTCTGTAAGCAAGAGGTTCAAAACCTACCCGTTACACTTCTACGAATTCACAATGGTCAGGCACAAGGAAGTCGGAGGCAGCAAGGTGATGTAGCTGTATACAGGGTTTGGCATGATGTCCCAGTCCTTGTAATTGTAAGCATGCTTGCATACTTCTGTTTTCTTGAACAGCTTCTGGTCAAGAAAATGGGTTCTGGTGCAATTGCAATATCGCTTCCATTTTCATGCATTTTGGGCCTCCTTGCATCAATGACATCGACAACAATGGCATCAAGTAAGATTCATTTGGATGTATGCTGCTGCTCAATTCATTATGGTGGTTTCCTTTGCCCATATATTGTTCTCCCTGTTACACATGCAAGCAGTTGTATCAGTCTTAGTTGCAACTTTTGCTGGTTTTGGAGTGACAATGTGTGGAACCTCCATTTTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35787.p1 GENE.S_Transcript_35787~~S_Transcript_35787.p1 ORF type:complete len:438 (+),score=83.52,RINGv|PF12906.3|1.3e-11 S_Transcript_35787:187-1500(+)
MGTEGGSVREEENGNQQIESTEIIEEISPGNWRRPQNLVLEIPSRGAECSPEDAVTINILPTPSPTPKRVNFSPIHGPSTARLNRSRSSSFLKDKSSFKSLLPKLSFKFKNSSSEIEKAAVIALGSPSSGRGDRPRFARTFSLTKVFTPKGNKASSVPVTPISHSNPGSAHGGYRGRVQFGIHRSLSVPDLYKDGSTHQVDSFGGLFRVIPTTPRAREGILKASDSSIAVPDDKDDGGEDIAEEEAVCRICYVELGEGSETLKMECSCKGDLALAHQECAVKWFSIKGNKICEVCKQEVQNLPVTLLRIHNGQAQGSRRQQGDVAVYRVWHDVPVLVIVSMLAYFCFLEQLLVKKMGSGAIAISLPFSCILGLLASMTSTTMASSKIHLDVCCCSIHYGGFLCPYIVLPVTHASSCISLSCNFCWFWSDNVWNLHFS*

Click here to download the sequence:
Link to NCBI Protein BLAST