Transcript Information: S_Transcript_35800.p1


Annotated TAIR IDAT1G72050.2
Annotated Gene Nametranscription factor IIIA
Annotated Gene Symbol(s)TFIIIA
Annotation TypeOrtholog
Chromosome Positionchr1:27115082-27117228 | Forward length=412
E-Value7.9E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.792789276768
Replicate 219.642636621359
Replicate 317.878162530021
Condition 2: 8 Hour
Replicate 115.232421655095
Replicate 215.865749800622
Replicate 316.367525839539
Condition 3: 24 Hour
Replicate 117.721104464308
Replicate 218.616702366285
Replicate 313.962203152832


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35800.p1 GENE.S_Transcript_35800~~S_Transcript_35800.p1 ORF type:complete len:392 (+),score=51.86,zf-C2H2|PF00096.22|0.0071,zf-C2H2|PF00096.22|5.4e-05,zf-C2H2|PF00096.22|0.022,zf-C2H2|PF00096.22|0.61,zf-C2H2|PF00096.22|0.0045,zf-C2H2|PF00096.22|45,zf-C2H2|PF00096.22|1.6e+04,zf-C2H2|PF00096.22|0.006,zf-C2H2|PF00096.22|2.9e+02,zf-C2H2_4|PF13894.2|4.1,zf-C2H2_4|PF13894.2|0.0066,zf-C2H2_4|PF13894.2|0.068,zf-C2H2_4|PF13894.2|0.025,zf-C2H2_4|PF13894.2|0.007,zf-C2H2_4|PF13894.2|6,zf-C2H2_4|PF13894.2|1.4e+02,zf-C2H2_4|PF13894.2|0.016,zf-C2H2_4|PF13894.2|2.4e+03,zf-H2C2_2|PF13465.2|87,zf-H2C2_2|PF13465.2|3,zf-H2C2_2|PF13465.2|0.00012,zf-H2C2_2|PF13465.2|0.1,zf-H2C2_2|PF13465.2|2.1,zf-H2C2_2|PF13465.2|3.8e+02,zf-H2C2_2|PF13465.2|10,zf-H2C2_2|PF13465.2|0.46 S_Transcript_35800:58-1176(+)
ATGGCGGAATCACAAGGCGAGGTCAAAAGAGAGCCAATATTCAGAGACATAAGACGTTACAACTGCAAATTTTGCGGCGAATCTCGATCCAAAAAAGCCCTACTCACCACTCACATGCAAAAGGAACATCCGGATGAGTTTGAGAAGCAAAAAGACCAGAACTTGGAAGAAGAAAATGAAGGGAAAAAGTTGAATGATAGAACTTGTGAAGAATGTGGTGCAACTTTTAAGAAGCCTGCCCATTTAGAACAACATATGAAGATACACTCTAATGAGAAGCCCTTTGTTTGTACGGTTGATGACTGTTGTAGCAGTTTCAAGAGGAAATACCACTTAGAGCGCCATATGAACCAGCATGAAGGAAAGCTGTTCAAATGCCCAATTGAAGGTTGTAATAAGGAGTTGAGTGTATACGGGAATATGGCAAGACATGTAAAAGAAATGCATCAAGGAAAGCCTACTCCCTGCAATGTAAAGGAAAAAATGAAGCATCTCTGTCCGGAAGTTGGTTGTGGAAAGGAGTTCAAATTCCCTAGTCAGTTGCGTGATCATCTATTGTTTCATGTTAAATTGGATTCAGAAGCAATCTGCGCTGATCCTGCCTGTATGCAACGTTTCCCCAATATTGAGTCCCTCCGAGAACATACTAGGTCGTGCCACCAATATATAAAGTGCGATGTTTGTGGTTGCATGCATCTAAGGAAGAACATCAAAAGGCACCTCCGAAGTCATGAAGAGCACCCACACGAGGTCTTCCAGTGCCAAGTTGAGGGTTGCAATGCCTCGTATACCACTAAATATAATCTCAGGACCCATGTGGAAGCAGTGCACCTGAATCTCAAGCCTTTTTTCTGTAGAGTTCCTGGTTGTGGCGAGAGCTTTGCCTTGAAGCATGTTAGAGACCGCCACGAGACAAGCAGCTGCCATTATGTGCATGGAGATCTTGAGGAGTTTGATGAGCAATTTCGATCGAAGCCTCGTGGTGGCCGGAAAAGGGCGTATCCAACTGTCGAAACTCTTTTGCGGAAAAGGGTTACCCCACCTAACCTAGATGATGATGGTGTCCTTAAGGGCTCAGATTATATATCATGGTTGCTCTCGACAGATTCAGACGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35800.p1 GENE.S_Transcript_35800~~S_Transcript_35800.p1 ORF type:complete len:392 (+),score=51.86,zf-C2H2|PF00096.22|0.0071,zf-C2H2|PF00096.22|5.4e-05,zf-C2H2|PF00096.22|0.022,zf-C2H2|PF00096.22|0.61,zf-C2H2|PF00096.22|0.0045,zf-C2H2|PF00096.22|45,zf-C2H2|PF00096.22|1.6e+04,zf-C2H2|PF00096.22|0.006,zf-C2H2|PF00096.22|2.9e+02,zf-C2H2_4|PF13894.2|4.1,zf-C2H2_4|PF13894.2|0.0066,zf-C2H2_4|PF13894.2|0.068,zf-C2H2_4|PF13894.2|0.025,zf-C2H2_4|PF13894.2|0.007,zf-C2H2_4|PF13894.2|6,zf-C2H2_4|PF13894.2|1.4e+02,zf-C2H2_4|PF13894.2|0.016,zf-C2H2_4|PF13894.2|2.4e+03,zf-H2C2_2|PF13465.2|87,zf-H2C2_2|PF13465.2|3,zf-H2C2_2|PF13465.2|0.00012,zf-H2C2_2|PF13465.2|0.1,zf-H2C2_2|PF13465.2|2.1,zf-H2C2_2|PF13465.2|3.8e+02,zf-H2C2_2|PF13465.2|10,zf-H2C2_2|PF13465.2|0.46 S_Transcript_35800:58-1176(+)
MAESQGEVKREPIFRDIRRYNCKFCGESRSKKALLTTHMQKEHPDEFEKQKDQNLEEENEGKKLNDRTCEECGATFKKPAHLEQHMKIHSNEKPFVCTVDDCCSSFKRKYHLERHMNQHEGKLFKCPIEGCNKELSVYGNMARHVKEMHQGKPTPCNVKEKMKHLCPEVGCGKEFKFPSQLRDHLLFHVKLDSEAICADPACMQRFPNIESLREHTRSCHQYIKCDVCGCMHLRKNIKRHLRSHEEHPHEVFQCQVEGCNASYTTKYNLRTHVEAVHLNLKPFFCRVPGCGESFALKHVRDRHETSSCHYVHGDLEEFDEQFRSKPRGGRKRAYPTVETLLRKRVTPPNLDDDGVLKGSDYISWLLSTDSDE*

Click here to download the sequence:
Link to NCBI Protein BLAST