Transcript Information: S_Transcript_358857.p1


Annotated TAIR IDAT5G27220.1
Annotated Gene NameFrigida-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9578757-9582752 | Forward length=1181
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33475473251799
Replicate 20.83255809650999
Replicate 30.11599205084026
Condition 2: 8 Hour
Replicate 10.67060975840041
Replicate 20.56281380225727
Replicate 30.80437160773515
Condition 3: 24 Hour
Replicate 10.54955681737344
Replicate 20.5701587817949
Replicate 30.31725842019014


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_358857.p1 GENE.S_Transcript_358857~~S_Transcript_358857.p1 ORF type:5prime_partial len:159 (+),score=12.76,Frigida|PF07899.7|1.3e-20 S_Transcript_358857:1-477(+)
CTCATTGAGCATATGACAGAGCATGATTTGTTTCAAGAGAATATTTTGGACACTCTTCGAGATGCACCGGATCCAGCACAACTGGTTTTTAATGTGGTTCGAACGTTTGATCAACCGGGCTCAACCACGGTCAACAAAACTAGTTGCATATATTTGTTAGAGCAGTTCATGAAATTACAAAACCAACCAACAAGGAAGGACCGACTAGGTAGTGGAGAACGGTCCATGTTTCAACCATATCAGGTTGCACCTAATTTGTATTATGAAGCTAAGTGTTTTGCTTCTATTTGGAAACGTAGATTGGCTATGGAAAAAAATGAACAGTTGGAGATTTATGGCTATCTACAATTTCTAGCCACATACAAGTTAGCAAAGTCATATGATGTAGATGAACTTTTTAAACTTTTTAGAAAACTTTATGATAGGATGTCTACCAAGCTAAGCAAAATCCATATTTATGCCAAGAATTGGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_358857.p1 GENE.S_Transcript_358857~~S_Transcript_358857.p1 ORF type:5prime_partial len:159 (+),score=12.76,Frigida|PF07899.7|1.3e-20 S_Transcript_358857:1-477(+)
LIEHMTEHDLFQENILDTLRDAPDPAQLVFNVVRTFDQPGSTTVNKTSCIYLLEQFMKLQNQPTRKDRLGSGERSMFQPYQVAPNLYYEAKCFASIWKRRLAMEKNEQLEIYGYLQFLATYKLAKSYDVDELFKLFRKLYDRMSTKLSKIHIYAKNWV*

Click here to download the sequence:
Link to NCBI Protein BLAST