Transcript Information: S_Transcript_35911.p2


Annotated TAIR IDAT2G06210.1
Annotated Gene Namebinding
Annotated Gene Symbol(s)ELF8, VIP6
Annotation TypeOrtholog
Chromosome Positionchr2:2429108-2436588 | Reverse length=1091
E-Value1.7E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6720210200113
Replicate 21.6749238145757
Replicate 31.7380588979309
Condition 2: 8 Hour
Replicate 12.902932713327
Replicate 22.459732049394
Replicate 33.7944440762794
Condition 3: 24 Hour
Replicate 12.6877212671673
Replicate 22.4918326864047
Replicate 31.9147625333727


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_35911.p2 GENE.S_Transcript_35911~~S_Transcript_35911.p2 ORF type:5prime_partial len:382 (+),score=88.79,TPR_1|PF00515.24|0.0029,TPR_1|PF00515.24|2.1e-07,TPR_1|PF00515.24|0.041,TPR_1|PF00515.24|3.6e+03,TPR_1|PF00515.24|5.5e+02,TPR_1|PF00515.24|0.0088,TPR_1|PF00515.24|1.4e+02,TPR_1|PF00515.24|2.5e+02,TPR_8|PF13181.2|0.00026,TPR_8|PF13181.2|9.4e-05,TPR_8|PF13181.2|0.0034,TPR_8|PF13181.2|8.5e+02,TPR_8|PF13181.2|0.17,TPR_8|PF13181.2|1.6e+03,TPR_8|PF13181.2|13,TPR_12|PF13424.2|3.3e-11,TPR_12|PF13424.2|0.0019,TPR_12|PF13424.2|0.004,TPR_12|PF13424.2|14,TPR_12|PF13424.2|12,TPR_12|PF13424.2|8.8e+02,TPR_2|PF07719.13|0.004,TPR_2|PF07719.13|6.1e-06,TPR_2|PF07719.13|0.056,TPR_2|PF07719.13|5.4e+02,TPR_2|PF07719.13|0.16,TPR_2|PF07719.13|78,TPR_2|PF07719.13|10,TPR_11|PF13414.2|1e-09,TPR_11|PF13414.2|0.0016,TPR_11|PF13414.2|0.0012,TPR_11|PF13414.2|1.7,TPR_11|PF13414.2|0.014,TPR_16|PF13432.2|5.8,TPR_16|PF13432.2|0.05,TPR_16|PF13432.2|0.061,TPR_16|PF13432.2|18,TPR_16|PF13432.2|0.3,TPR_16|PF13432.2|7.7,TPR_7|PF13176.2|0.0023,TPR_7|PF13176.2|0.11,TPR_7|PF13176.2|9.2,TPR_7|PF13176.2|6.3e+02,TPR_7|PF13176.2|0.023,TPR_7|PF13176.2|2.6e+03,TPR_7|PF13176.2|1.5e+03,TPR_7|PF13176.2|1.6e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|0.51,TPR_14|PF13428.2|2.9e-05,TPR_14|PF13428.2|1.1e+04,TPR_14|PF13428.2|43,TPR_14|PF13428.2|2.2e+02,TPR_14|PF13428.2|26,TPR_14|PF13428.2|4.1e+03,TPR_17|PF13431.2|0.38,TPR_17|PF13431.2|4.2,TPR_17|PF13431.2|0.049,TPR_17|PF13431.2|2.6,TPR_17|PF13431.2|1e+02,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|2e+02,TPR_17|PF13431.2|5.5e+03,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|8.3e-07,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|32,TPR_19|PF14559.2|3.4e+02,TPR_6|PF13174.2|0.099,TPR_6|PF13174.2|0.0016,TPR_6|PF13174.2|90,TPR_6|PF13174.2|1.7e+03,TPR_6|PF13174.2|2.9e+02,TPR_6|PF13174.2|5e+03,TPR_6|PF13174.2|2e+02,TPR_10|PF13374.2|0.063,TPR_10|PF13374.2|1.8,TPR_10|PF13374.2|8.1e+02,TPR_10|PF13374.2|8.2e+03,TPR_10|PF13374.2|0.004,TPR_10|PF13374.2|1e+03,ANAPC3|PF12895.3|0.062,ANAPC3|PF12895.3|0.034,ANAPC3|PF12895.3|1.6e+02,ANAPC3|PF12895.3|8.2 S_Transcript_35911:3-1148(+)
CATTCTTACTACAATTTGGCTCGGTCTTACCATAGCAAGGGTGATTATGAGAAAGCTGGGCGGTACTACATGGCATCTGTCAAGGAAAGCAGCAAGCCTCAGGAATTTGTGTTACCATACTATGGATTGGGACAAGTACAGTTGAAGTTGGGAGACTACAGAAGTGCCCTTGCCAACTTTGAAAAGGTGTTGGAGGTCTACCCTGAGAACTGTGAGACACTGAAGGCTCTTGGACACATCTATGCTATCCTTCACCAGACGGAGAAAGCTATGGAGGTTTTGAGGAAAGTTACTCGAGTTGACCCCCGTGATGCTCAGGCATATCTTGATCTGGGGGAGCTGCTGGTCACATGTGATACCGCAGCTGCTCTAGAAGCCTACAAAACTGCATGTGGTCTTCTGAAGAAAGGCGGTGAAGATGTAACAATAGAGCTTCTCAACAATATTGGAGTTCTTCACTTTGAAAGGGGAGAATTTGAGCTTGCAGAACAAATTTTCAAGGATGCTTTAGGCAATGGTGTATGGCTTTCATTAATAAATGGCAAAGAAAACAATTATGCTCTGGATGCAATAACTGCTTTGCTTCAGTATAAGGATGTTCAGATCTTTCATTGTCTTGAGGAAGGAAATGGCATTGAACTACCCTGGAATAAAGTATCAACAGTATTTAATCTAGCTCGGTTATGTGAGGAGTCACATAAAACTCTAAGTTCGATTTTGTTGTATCGTTTAATTTTATTTAAGTATCCAGAGTATGTGGATGCTCTTCTGAGGCTTGCTGGTGTAGCCAAGGCGCGAAACAATGTTCAATTAAGCATTGAATTGGTTGGTGAAGCACTCAAGGTGAACGAGAAGTGTCCTAGTGCACTAGCAATTCTAGGATGCTTGGAGCTTAAGAATGATGAATGGGTCAAAGCTAAGGAAACTTTCCGTGCAGCTAGTGAGGCTGGTGATCGGAAGGATTCTTATGCTTCTGTTTGTCTGGGAAACTGGAATTACTTTGCGGCACTTGTGAGTGAGTCAAAAAAAGCAGGTCAAGCACATTCCCGTCCACTTGGAGAAAGCAAAAGACATTTTCTCAAATGTTTTAAAACAGTGCACTACCAATTTATATGCTGCAAATGGGCTGGGGATGATACTTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_35911.p2 GENE.S_Transcript_35911~~S_Transcript_35911.p2 ORF type:5prime_partial len:382 (+),score=88.79,TPR_1|PF00515.24|0.0029,TPR_1|PF00515.24|2.1e-07,TPR_1|PF00515.24|0.041,TPR_1|PF00515.24|3.6e+03,TPR_1|PF00515.24|5.5e+02,TPR_1|PF00515.24|0.0088,TPR_1|PF00515.24|1.4e+02,TPR_1|PF00515.24|2.5e+02,TPR_8|PF13181.2|0.00026,TPR_8|PF13181.2|9.4e-05,TPR_8|PF13181.2|0.0034,TPR_8|PF13181.2|8.5e+02,TPR_8|PF13181.2|0.17,TPR_8|PF13181.2|1.6e+03,TPR_8|PF13181.2|13,TPR_12|PF13424.2|3.3e-11,TPR_12|PF13424.2|0.0019,TPR_12|PF13424.2|0.004,TPR_12|PF13424.2|14,TPR_12|PF13424.2|12,TPR_12|PF13424.2|8.8e+02,TPR_2|PF07719.13|0.004,TPR_2|PF07719.13|6.1e-06,TPR_2|PF07719.13|0.056,TPR_2|PF07719.13|5.4e+02,TPR_2|PF07719.13|0.16,TPR_2|PF07719.13|78,TPR_2|PF07719.13|10,TPR_11|PF13414.2|1e-09,TPR_11|PF13414.2|0.0016,TPR_11|PF13414.2|0.0012,TPR_11|PF13414.2|1.7,TPR_11|PF13414.2|0.014,TPR_16|PF13432.2|5.8,TPR_16|PF13432.2|0.05,TPR_16|PF13432.2|0.061,TPR_16|PF13432.2|18,TPR_16|PF13432.2|0.3,TPR_16|PF13432.2|7.7,TPR_7|PF13176.2|0.0023,TPR_7|PF13176.2|0.11,TPR_7|PF13176.2|9.2,TPR_7|PF13176.2|6.3e+02,TPR_7|PF13176.2|0.023,TPR_7|PF13176.2|2.6e+03,TPR_7|PF13176.2|1.5e+03,TPR_7|PF13176.2|1.6e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|0.51,TPR_14|PF13428.2|2.9e-05,TPR_14|PF13428.2|1.1e+04,TPR_14|PF13428.2|43,TPR_14|PF13428.2|2.2e+02,TPR_14|PF13428.2|26,TPR_14|PF13428.2|4.1e+03,TPR_17|PF13431.2|0.38,TPR_17|PF13431.2|4.2,TPR_17|PF13431.2|0.049,TPR_17|PF13431.2|2.6,TPR_17|PF13431.2|1e+02,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|2e+02,TPR_17|PF13431.2|5.5e+03,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|8.3e-07,TPR_19|PF14559.2|2.2,TPR_19|PF14559.2|32,TPR_19|PF14559.2|3.4e+02,TPR_6|PF13174.2|0.099,TPR_6|PF13174.2|0.0016,TPR_6|PF13174.2|90,TPR_6|PF13174.2|1.7e+03,TPR_6|PF13174.2|2.9e+02,TPR_6|PF13174.2|5e+03,TPR_6|PF13174.2|2e+02,TPR_10|PF13374.2|0.063,TPR_10|PF13374.2|1.8,TPR_10|PF13374.2|8.1e+02,TPR_10|PF13374.2|8.2e+03,TPR_10|PF13374.2|0.004,TPR_10|PF13374.2|1e+03,ANAPC3|PF12895.3|0.062,ANAPC3|PF12895.3|0.034,ANAPC3|PF12895.3|1.6e+02,ANAPC3|PF12895.3|8.2 S_Transcript_35911:3-1148(+)
HSYYNLARSYHSKGDYEKAGRYYMASVKESSKPQEFVLPYYGLGQVQLKLGDYRSALANFEKVLEVYPENCETLKALGHIYAILHQTEKAMEVLRKVTRVDPRDAQAYLDLGELLVTCDTAAALEAYKTACGLLKKGGEDVTIELLNNIGVLHFERGEFELAEQIFKDALGNGVWLSLINGKENNYALDAITALLQYKDVQIFHCLEEGNGIELPWNKVSTVFNLARLCEESHKTLSSILLYRLILFKYPEYVDALLRLAGVAKARNNVQLSIELVGEALKVNEKCPSALAILGCLELKNDEWVKAKETFRAASEAGDRKDSYASVCLGNWNYFAALVSESKKAGQAHSRPLGESKRHFLKCFKTVHYQFICCKWAGDDTC*

Click here to download the sequence:
Link to NCBI Protein BLAST