Transcript Information: S_Transcript_359172.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.21465569706482


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_359172.p2 GENE.S_Transcript_359172~~S_Transcript_359172.p2 ORF type:complete len:235 (-),score=29.40,RVT_1|PF00078.23|9.4e-30 S_Transcript_359172:960-1664(-)
ATGGCTTATTTGATCAAAAAAGCCTCGAAAAAGAAGCACATCCTCTCCCTTAAAGCTGACTTAACCAAGGCCTTTGATAGTTTGGAATGGGACTTCATCAGGGACACCCTTTGTGGATTTGGGTTCCCTTCGAAATTCACAAGATTTGTCATGTCCTGTGTCACATCGGCTAAAATCTCTGTGCTTTGGAATGGGGAAATCACGGAGCCTTTCCTCCCTGCCAGGGGCATTCGGCAAGGAGACCTTCTCTCGCCATACATTTTTGTGTTGTGCATGGACCGCTTATCTCAAATGATTGAGTCGAGCGTGTCTAGTGGAGGCTACATTCCTGTTTCGATCGATCAAAACCTCAAAATCTCTCATATCTTCTACGCGGATGATGTCCTCTTGTTTGGCAGAGCTACTCCATCCAATGTGGAGGCCATGACTGCTGTCCTGGATAATTTTGGGGAAGCTTCAGGTCTTGTCATAAAAAAAGCTAAATCCAAGCTCATTTTTCCCCCTTCTATGCACCATCGGTTTCGGCGTCTTATTGCCGGAGCTTGTGGAATCCCAGGTAGTACTTCGTTTGGTACCTACCTTGGCCTTCCCATCTCTGCGAATACTCTCAAAGTCAAGGATTTTCATTTCCTCCTTGATAAGGTTAAAGCTAGGCTTCAGGGTTGGCAAGGGAAATTCCTCAATTTGGCGGGCAATGTACCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_359172.p2 GENE.S_Transcript_359172~~S_Transcript_359172.p2 ORF type:complete len:235 (-),score=29.40,RVT_1|PF00078.23|9.4e-30 S_Transcript_359172:960-1664(-)
MAYLIKKASKKKHILSLKADLTKAFDSLEWDFIRDTLCGFGFPSKFTRFVMSCVTSAKISVLWNGEITEPFLPARGIRQGDLLSPYIFVLCMDRLSQMIESSVSSGGYIPVSIDQNLKISHIFYADDVLLFGRATPSNVEAMTAVLDNFGEASGLVIKKAKSKLIFPPSMHHRFRRLIAGACGIPGSTSFGTYLGLPISANTLKVKDFHFLLDKVKARLQGWQGKFLNLAGNVP*

Click here to download the sequence:
Link to NCBI Protein BLAST