Transcript Information: S_Transcript_359347.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50451187175698
Replicate 20
Replicate 30.34962532859906
Condition 2: 8 Hour
Replicate 10
Replicate 20.10602771867169
Replicate 30.20204594886238
Condition 3: 24 Hour
Replicate 10.31059076052978
Replicate 20.10741142927179
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_359347.p1 GENE.S_Transcript_359347~~S_Transcript_359347.p1 ORF type:5prime_partial len:211 (+),score=19.07,PIF1|PF05970.10|1.2e-20,Herpes_Helicase|PF02689.10|2.1e-08 S_Transcript_359347:1-633(+)
CCAACAAATGATGAGGTTGATTGTATTAACAAGTTGGTGATAGAGAATTTCCCAGGGGAATCACATACTTACAAAAGTTATGACGCTACATTAGACGATGATTGCAATGCTCATCCCATTGAATTCCTCAATACATTGTGCCCAGGTGGGATGAGTCCTCATGTACTAACATTGAAGCTCAACTGCCCTGTCATCTTGCTTCGAAATCTAAGCCCGTCTACAGGCCTTTGCAATGGCACTAGACTCATCTGCAGAGGCTTCAAGGCAAATGTTCTTATTTGTGAAATAGCCACAGGATATCGTGCTGGAGAGTTTGTCTTTATTCCACGAATAAATCTGAGGCCATCTACATCGATCACATATCCATACAAATTTGAAAGACGACAATTCCCAATCAAGCTATGTTTTGCAATGACCATTAACAAATCACAGGGCCAAACATTAAGTGAAGTAGCTGTATACCTCCGCCGGCATTGTTTCTCACATGGGCAGCTATACGTTGCATTGTCAAGAGCTAGGACAACAAAGAGTGTGAAGGTCTTTATTGATCCCATCGAGGAAGCAGATGAGTGCTCAACCTCAGTAACCAATGTTGTATCTTTTGAAGTCCTTAGAAAAGCTGGTGTGCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_359347.p1 GENE.S_Transcript_359347~~S_Transcript_359347.p1 ORF type:5prime_partial len:211 (+),score=19.07,PIF1|PF05970.10|1.2e-20,Herpes_Helicase|PF02689.10|2.1e-08 S_Transcript_359347:1-633(+)
PTNDEVDCINKLVIENFPGESHTYKSYDATLDDDCNAHPIEFLNTLCPGGMSPHVLTLKLNCPVILLRNLSPSTGLCNGTRLICRGFKANVLICEIATGYRAGEFVFIPRINLRPSTSITYPYKFERRQFPIKLCFAMTINKSQGQTLSEVAVYLRRHCFSHGQLYVALSRARTTKSVKVFIDPIEEADECSTSVTNVVSFEVLRKAGVL*

Click here to download the sequence:
Link to NCBI Protein BLAST