Transcript Information: S_Transcript_359560.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value5E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1572407753925
Replicate 20.16294526999642
Replicate 30.16345113220325
Condition 2: 8 Hour
Replicate 10.47249756980354
Replicate 20.49568350014165
Replicate 30.47228613600402
Condition 3: 24 Hour
Replicate 10.32267183885663
Replicate 20.23433778587065
Replicate 30.33530044260863


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_359560.p1 GENE.S_Transcript_359560~~S_Transcript_359560.p1 ORF type:complete len:677 (+),score=119.85,Frigida|PF07899.7|5e+03,Frigida|PF07899.7|3.1e-72 S_Transcript_359560:109-2139(+)
ATGACAGCTACTTCATCACTCACAAGCGAATCCTCATTATCATCATCATCAATGGCGGAAAACTTGAACATCGCAACAGTGAAGCGAGAAAACATTCGTGAAACCCTAGAATTGATCCATACACAATCAAGCACAGGTCTACTACTCGGTCTTCAATGGAAGGACCTAGAAGACCATTTCGACTCAATCTTCACCGCCATAAACAAGCAATTGGAAGAAATTGACCTGAAAACGTACCAAATCGAGTGGAAACACAAATACCTAAAAAATAAGTCGAACGAAATCGCGGTTAAGGAAAATGAGGTGAGAGAGAGCTTGAAAATGGCTGATGATCGGTGTAAGGAAATCGATGCTACGTACGAACTGGTAAGCAGATGTTACGGAGTTGTAAGAGAGAGAAAGGAGAAATACGATCATGAGTTGAAGAAGTTTAAGCGAAAATATGAGAAGTTGAGAGAGTATGAGGGTCATTTGAGGAGGAAATTCGAGAAAAAGGAGTTGAAATTGGACTCTAGAGAGAAGAAGTTAGGGTTTATTGAGAGGAAATTGTTGGAAAGGATTCAGGAGGTTGATGAGAGAGAGAGAGCGCTTTTGAGGAGAGAGAAATTGTTTGAGATTAAAAAAGAGCCACTGTATGATGATGATTATGATAATGATTGTGATAATGATCCAACATATGCTGATCTTAGGTTAAATGTGACAATGGATGGTAGGGCATTGCAAGTGTTCTTAAATGGGAGATTTAATGATCATGAAATTCTAAGAGATGAGATTCTTGTTGGACTAGGATTGTCGCGTGACCCTGCAAAATTGGTGTTAGATGCAATGCAAGGGTTTTACCCTGATCATGATGTGGGTTTTGATCATTTGAAGGTTGTTAGGAAGAGTTGTGTGTTGTTGTTGGAGCAGTTGGCTAAGATGAAACCACGACTTAGGGCTCGTGTGAGGGAGAGGGCAATGAATGTAGCAATGGAATGGAAAGGGAGGATGAAGCTTAGTGATCTTGATGAGGGTCATTGTTTGGAGGTTGTTGGGTTCTTGCAGCTTGTAGCTTCTTATGGGTTGGTTAGTGAGTTTAATAAGGATGAGCTAATGGGGCTTTTCGAGAGTTGTGCCCAGCAAGATCGAGCCCCTGAGTTGTGTCGTAGTCTTGGTTTCGGAGATGAAATTCATGATATTATCCAGAATCTTATTCTGAGACACCAGCGAATTGAGGCTGTGAGGCTTGTGTATGCATTTGAATTAGTTGATATATTTCCTCCTGTACCCATTCTGAAGGCGCACTTGAGTAAAATTTTCACTGATGCTGAGAAAACATACAAGAATGGAGACCCTATAGTTGAGGCACAGATCAAGTGTATAAGTATGAAGCTAGCAGCGCTGATCTCTGTTGTCAACTGTATCAAGGAGTATGGTATTGAGTCTAAATACCCAGTTCGACCTCTTGAGAAGCTAATCTCCGAGCTCAAAAGGCAGAGAAGGAAATGTAGCCTCTCAGCCCCTACATGCAAGTCCCAACTGAAAATACAGAATGAAGAACTTTGCTTTTACTTGAACCCCATCTCACCAGACTCACCCTTAGTCGAACATACCACCTCGTTGACCCTTAAGGACCACGAGTTAGCTCTTGGTACTTTTACTGCCACGCAGAAGTGCATCAAGTCAACCCTTGGTCTTAAATCAAGCCCTATCTCCTCCACAAACTCTGAACCCTGTGACATTGGCAGTAATCTCTGCCCTAACACCCTCTCCAATGACTCTTACACAACCGATCTTGCATATTCTACCAGCCACAAAAACTCTTATACATCTCAGACAGGTTTTTCCAGCCTGAATGTCCAGCCACAAAGCTCTACTGGCAACAACAGGCCTCGTTCGGTTTCTGAGTTGGTTAGCAATTCAGGTAGTCCAAGCGCAGCACTTTTAAACCCACAACCGCCTTTATGCGCTTATCGTCCTGTCGACTACTTGCAAGCTACTTCAGCAAGGGGGAGTTATGGTGACTATGTTGTGCGTCCATATTGCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_359560.p1 GENE.S_Transcript_359560~~S_Transcript_359560.p1 ORF type:complete len:677 (+),score=119.85,Frigida|PF07899.7|5e+03,Frigida|PF07899.7|3.1e-72 S_Transcript_359560:109-2139(+)
MTATSSLTSESSLSSSSMAENLNIATVKRENIRETLELIHTQSSTGLLLGLQWKDLEDHFDSIFTAINKQLEEIDLKTYQIEWKHKYLKNKSNEIAVKENEVRESLKMADDRCKEIDATYELVSRCYGVVRERKEKYDHELKKFKRKYEKLREYEGHLRRKFEKKELKLDSREKKLGFIERKLLERIQEVDERERALLRREKLFEIKKEPLYDDDYDNDCDNDPTYADLRLNVTMDGRALQVFLNGRFNDHEILRDEILVGLGLSRDPAKLVLDAMQGFYPDHDVGFDHLKVVRKSCVLLLEQLAKMKPRLRARVRERAMNVAMEWKGRMKLSDLDEGHCLEVVGFLQLVASYGLVSEFNKDELMGLFESCAQQDRAPELCRSLGFGDEIHDIIQNLILRHQRIEAVRLVYAFELVDIFPPVPILKAHLSKIFTDAEKTYKNGDPIVEAQIKCISMKLAALISVVNCIKEYGIESKYPVRPLEKLISELKRQRRKCSLSAPTCKSQLKIQNEELCFYLNPISPDSPLVEHTTSLTLKDHELALGTFTATQKCIKSTLGLKSSPISSTNSEPCDIGSNLCPNTLSNDSYTTDLAYSTSHKNSYTSQTGFSSLNVQPQSSTGNNRPRSVSELVSNSGSPSAALLNPQPPLCAYRPVDYLQATSARGSYGDYVVRPYCL*

Click here to download the sequence:
Link to NCBI Protein BLAST