Transcript Information: S_Transcript_359581.p1


Annotated TAIR IDAT5G50290.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20461814-20463896 | Forward length=303
E-Value3.3E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73246792390405
Replicate 20.53976243565785
Replicate 30.39479863175903
Condition 2: 8 Hour
Replicate 11.0434441745386
Replicate 20.41049263559131
Replicate 31.0429772528431
Condition 3: 24 Hour
Replicate 10.46762747533382
Replicate 20.76239121510649
Replicate 30.38565817133205


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_359581.p1 GENE.S_Transcript_359581~~S_Transcript_359581.p1 ORF type:5prime_partial len:327 (+),score=19.11,GUB_WAK_bind|PF13947.2|9.3e-16,GUB_WAK_bind|PF13947.2|1.2e+04 S_Transcript_359581:3-983(+)
CACCAGTTCTTTCTCCTTTCACTTGTCATGAATTCCTTCATAACAGCCACTCTTTTTATAACAATCCTCCCTTGTATTTTGGTATCTCTAGGTTCAGGTTATGGTCACAATAACACATGTAGGTCCTATTGTGGCAATGTCACAATTGACTACCCATTTGGGGTCAAATACGGGTGTGGACATCCGGGTTACTGGGACCTCTTATATTGCATCAATGATGTCCTAATGCTCCATATAAGTTCAGGCTCCTACAGGGTCCTCAACATTGACTATGCTTTCCAAGCCCTCACATTGCATGACCCCCACCTCTCGACCTGCGACTCAATCGTCCTCGGATCACGAGGCAATGGGTTCGTGGTCGAGCCATGGCGGGCCCCGTATTTGAACCCGGCCCCCGAGAACGCTTTCTTGCTAATTGGTTGTTCAGCAAGGTCCTCACTCTTCCAAGGTTCCAAGCACTTGCCATGCAGGAACATTTCAGGGTTGGGTTGTGAGGATTACTATACTTGTCCTGCTTGGGGGTTTGTTGGGCCAACTCATGTGGGCTTGGTTTATGGATCAGGCCCACCAGAATGTTGTGGTGTTTCTTTTGATGATCTTGGGCCAGCCCAAGGTATAAATCTCACAAAACTCCAGTGCCAAGGTTATAGTAGTGCATATAGCCTGGCCCCATTAAAGGTTGATGGGCCACACGAGTGGTCTTATGGAATACGTGTGAGGTACTCGGTGCAAGGACATGATGGGTTTTGTAAATCGTGTGAGGCCACGGGTGGCACGTGTGGGTTTAGTGGTGACGATAGAAGTGGAATTACAGAGCTTTGCTTTTGTGGGACTTGGAATTCTACCTCAAATTGTGATTCCACATCTAATAATAATTCAGTGGAAGACCTGACATCCAGCAGCATTGAGTGGAGAGTCTCAAAAGGTGCCATAGCCTTAGCAGGACTCTTGAGTACAGTGGCTATATGGACTAGACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_359581.p1 GENE.S_Transcript_359581~~S_Transcript_359581.p1 ORF type:5prime_partial len:327 (+),score=19.11,GUB_WAK_bind|PF13947.2|9.3e-16,GUB_WAK_bind|PF13947.2|1.2e+04 S_Transcript_359581:3-983(+)
HQFFLLSLVMNSFITATLFITILPCILVSLGSGYGHNNTCRSYCGNVTIDYPFGVKYGCGHPGYWDLLYCINDVLMLHISSGSYRVLNIDYAFQALTLHDPHLSTCDSIVLGSRGNGFVVEPWRAPYLNPAPENAFLLIGCSARSSLFQGSKHLPCRNISGLGCEDYYTCPAWGFVGPTHVGLVYGSGPPECCGVSFDDLGPAQGINLTKLQCQGYSSAYSLAPLKVDGPHEWSYGIRVRYSVQGHDGFCKSCEATGGTCGFSGDDRSGITELCFCGTWNSTSNCDSTSNNNSVEDLTSSSIEWRVSKGAIALAGLLSTVAIWTRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST