Transcript Information: S_Transcript_359775.p1


Annotated TAIR IDAT1G45474.1
Annotated Gene Namephotosystem I light harvesting complex gene 5
Annotated Gene Symbol(s)LHCA5
Annotation TypeHomolog
Chromosome Positionchr1:17179353-17180439 | Forward length=256
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47807786650025
Replicate 20.52845004928179
Replicate 30.22087109082156
Condition 2: 8 Hour
Replicate 10.25539389601357
Replicate 20
Replicate 30.2552796120357
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_359775.p1 GENE.S_Transcript_359775~~S_Transcript_359775.p1 ORF type:internal len:167 (+),score=-12.43,Chloroa_b-bind|PF00504.17|1.5e-26 S_Transcript_359775:2-499(+)
GGCCGGCTCGCGATGGCGGCGGTCGCGGGCATCCTCATCCCCGGCGCCATCATCCCGGGCTTCGCGCAGTGGTTCGACGCCGGCGCGGCGGCGCTCAAGGTCTCGCCGTTCCCGTACTCGACGCTCTTCGCCATCGAGCTCTTCCTCTTCGGCTTCGTCGAGTGCAAGCGCTGGATGGACATCCTCAAGCCGGGCAGCCAAGGCGAGCCCGGCAGCTTCCTCGGCTTCGAGGGCATGCTCAAGGGCACGGACGCCGGGCCGGGGTACCCGGGCGGGCCGTTCAACCCCATGGGCATGGGCAAGGGCAACATGCAGGAGATGCAGACAAAGGAGATCAAGAACGGCCGCCTCGCGATGGTCGCGTTTGTGGGCTTTGTGTCACAGTACATTGCTACGGGCAAGGGCCCGATCCAGTGCCTGACTGACCATTTGGCCAACCCCTGGGCAAACAACTTCACAACCAACGGCGTGTCGATCCCGATCAAGGAGCTCAGATCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_359775.p1 GENE.S_Transcript_359775~~S_Transcript_359775.p1 ORF type:internal len:167 (+),score=-12.43,Chloroa_b-bind|PF00504.17|1.5e-26 S_Transcript_359775:2-499(+)
GRLAMAAVAGILIPGAIIPGFAQWFDAGAAALKVSPFPYSTLFAIELFLFGFVECKRWMDILKPGSQGEPGSFLGFEGMLKGTDAGPGYPGGPFNPMGMGKGNMQEMQTKEIKNGRLAMVAFVGFVSQYIATGKGPIQCLTDHLANPWANNFTTNGVSIPIKELRS

Click here to download the sequence:
Link to NCBI Protein BLAST