Transcript Information: S_Transcript_3606.p1


Annotated TAIR IDAT5G61670.1
Annotated Gene NameEncodes a close Homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons.
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24783629-24785201 | Forward length=307
E-Value9.8E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 171.408798345329
Replicate 276.603101631371
Replicate 388.261665542946
Condition 2: 8 Hour
Replicate 1131.1312820743
Replicate 2127.2833127577
Replicate 3114.19204074097
Condition 3: 24 Hour
Replicate 1117.09400280983
Replicate 292.837166053423
Replicate 3104.6479854821


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3606.p1 GENE.S_Transcript_3606~~S_Transcript_3606.p1 ORF type:complete len:322 (+),score=52.74 S_Transcript_3606:98-1063(+)
ATGCTCTGTTCAGGTCGAATTTTGGCGGTTTCTCAGTTAACCCTAACCCTAACTAAAAAACCCTCGATTGATAAAAATCATCATCAAACCTCCAGATTGTGCCGTAAAAAGCTCGAATTTTCTTCGAGATGGCGGTGTATGGCTTCTTCGATGGCTTCCGATTCCGATCCTTCTTCTTCTTCTTCCTTTCCCTCTGCTTCTCTCGATTCCGATCGAAATAATTCCGCTTTTTGTATTATAGAAGGGCCTGAAACAGTTGAAGATTTTGCAAAAATGGAATTGCAAGAAATTCAAGATAATATACGAAGCCGCAGGAATAAAATCTTCTTGCATATGGAAGAGGTTCGCCGGCTGCGGATACAACAGAGGATCAAAAGTGCTGAAGCTGGAAATCTACAAGAGGAACAGGAAAATGAACTCCCAAACTTCCCATCATTCATACCTTTTCTGCCTCCCCTGAATCCAGCTAATCTAAAGCAGTACTATGCGACTTGTTTCTCTCTTATTGCTGGAATTATGTTATTTGGAGGTCTTCTTGCACCTTCTTTGGAGCTTAAACTGGGATTGGGAGGCACGTCATATGCAGATTTCATCAGAAGCATGCATTTGCCCATGCAGTTAAGTGATGTAGATCCAATTGTAGCATCCTTCTCTGGTGGAGCTGTTGGAGTGATCTCAGCACTGATGGTGGTTGAAATTAACAATGTAAAACAGCAGGAGCATAAAAGATGCAAATACTGTCTTGGAACTGGCTATCTAGCATGTGCTCGCTGTTCTAGCACTGGAGCTGTTGTTTTGATTGAACCCATCGCAACAGTGAATTGCGGAGATCAATCTCTTTTGCCACCAAAGACTGAAAGGTGTTCAAATTGCGCAGGATCTGGAAAGGTTATGTGTCCTACTTGTCTCTGTACTGGGATGGCAATGGCAAGTGAACATGACCCGAGAATCGATCCATTTGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3606.p1 GENE.S_Transcript_3606~~S_Transcript_3606.p1 ORF type:complete len:322 (+),score=52.74 S_Transcript_3606:98-1063(+)
MLCSGRILAVSQLTLTLTKKPSIDKNHHQTSRLCRKKLEFSSRWRCMASSMASDSDPSSSSSFPSASLDSDRNNSAFCIIEGPETVEDFAKMELQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKSAEAGNLQEEQENELPNFPSFIPFLPPLNPANLKQYYATCFSLIAGIMLFGGLLAPSLELKLGLGGTSYADFIRSMHLPMQLSDVDPIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCLGTGYLACARCSSTGAVVLIEPIATVNCGDQSLLPPKTERCSNCAGSGKVMCPTCLCTGMAMASEHDPRIDPFD*

Click here to download the sequence:
Link to NCBI Protein BLAST