Transcript Information: S_Transcript_360756.p1


Annotated TAIR IDAT2G46000.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18921194-18922047 | Reverse length=208
E-Value8.8E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9835203178453
Replicate 22.5723431771093
Replicate 33.3081140957131
Condition 2: 8 Hour
Replicate 12.5819979307739
Replicate 22.809021353867
Replicate 33.2499498590554
Condition 3: 24 Hour
Replicate 12.5469370885895
Replicate 23.6587319136704
Replicate 31.9227567483721


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_360756.p1 GENE.S_Transcript_360756~~S_Transcript_360756.p1 ORF type:5prime_partial len:223 (+),score=35.28 S_Transcript_360756:2-670(+)
AAAACCTATAAAAACTCGAAAATCGTCAAAGAAAACAAGCGAAAAAGCATGAACCACCAAACCAACCAACCTTTCTCTCTCCTCTACTTGCTCTCCATCACTCTAATTCTCACTCACATCACCGGAACCCAATTCCCATTTGCTAAGGCCGGAAAAGTTCACATTCCCGACGACCTCGACGACGTAATTGACGACGAGGAAGACGATGACTGGAAAAACTGGGGCAAGAAAAAATCCAGCCCTGATCAATTCGACCTTAACCCTTCTGATTTGGACAATATGGAGCCTTCTCAGATCCAAGCTGAGTTGATGAAACGTCAATCGGGTCCAGTTTACGGGTTTGTTAAGCTCAGATTTGGCGTCCAGAGAACCAAGGATTCTGTAGCTGAAACAGCTATGAGATGGAGTCAAATTCTTCAAACCGGAGGTCTGGAAGTGAGGTTCATGGGAATGGATCTTAGCACAATCATGTTCACCTCAGAGACGGCCAAGTACATTGATGAGGTGAAGGACTATATATTGGAGCAGCAGGATGCGTATGAAGTTAAGATAGGGGACAGCATTTACCGCAGACCCGGAGATCCTCCCCTGGAGGAGGTTCTACAGACTTTACGCAAAGAAAACGAAGCTACTGATGAGCACAAGGAGCGAGCAAAGGAAGATTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_360756.p1 GENE.S_Transcript_360756~~S_Transcript_360756.p1 ORF type:5prime_partial len:223 (+),score=35.28 S_Transcript_360756:2-670(+)
KTYKNSKIVKENKRKSMNHQTNQPFSLLYLLSITLILTHITGTQFPFAKAGKVHIPDDLDDVIDDEEDDDWKNWGKKKSSPDQFDLNPSDLDNMEPSQIQAELMKRQSGPVYGFVKLRFGVQRTKDSVAETAMRWSQILQTGGLEVRFMGMDLSTIMFTSETAKYIDEVKDYILEQQDAYEVKIGDSIYRRPGDPPLEEVLQTLRKENEATDEHKERAKEDL*

Click here to download the sequence:
Link to NCBI Protein BLAST