Transcript Information: S_Transcript_360757.p1


Annotated TAIR IDAT2G46000.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18921194-18922047 | Reverse length=208
E-Value5E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0645200494072
Replicate 21.4708526371677
Replicate 30.90164487519825
Condition 2: 8 Hour
Replicate 11.3269131752883
Replicate 22.0880392063745
Replicate 31.136845205599
Condition 3: 24 Hour
Replicate 10.48544185534654
Replicate 21.0072805145043
Replicate 31.3451757016062


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_360757.p1 GENE.S_Transcript_360757~~S_Transcript_360757.p1 ORF type:5prime_partial len:225 (+),score=37.10 S_Transcript_360757:1-675(+)
CTGCGTGAAAAAATAAAAATAATCACGAAAATCATCAAATCAAACAAAACAAGCGAAGAAACCATGAACAACCAAACTTTCTCTCTCCTCTACTTGCTGTCCATCACTCTAATTCTTGCTCACATCACCGGAACCCAATTCCCATTTGCTAAGGCCGGAAAAGTTCACATTCCCGACGACCTCGACGACGTAATTGACGACGAGGAAGACGATGACTGGAAAAACTGGGGCAAGAAAAAATCCAGCCCTGATCAATTCGACCTTAACCCTTCTGATTTGGACAATATGGAGCCTTCTCAGATCCAAGCTGAGTTGATGAAACGTCAATCGGGTCCAGTTTACGGGTTTGTTAAGCTCAGATTTGGCGTCCAGAGAACCAAGGATTCTGTAGCTGAAACAGCTATGAGATGGAGTCAAATTCTTCAAACCGGAGGTCTGGAAGTGAGGTTCATGGGAATGGATCTTAGCACAATCATGTTCACCTCAGAGACGGCCAAGTACATTGATGAGGTGAAGGACTATATATTGGAGCAGCAGGATGCGTATGAAGTTAAGATAGGGGACAGCATTTACCGCAGACCCGGAGATCCTCCCCTGGAGGAGGTTCTACAGACTTTACGCAAAGAAAACGAAGCTACTGATGAGCACAAGGAGCGAGCAAAGGAAGATTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_360757.p1 GENE.S_Transcript_360757~~S_Transcript_360757.p1 ORF type:5prime_partial len:225 (+),score=37.10 S_Transcript_360757:1-675(+)
LREKIKIITKIIKSNKTSEETMNNQTFSLLYLLSITLILAHITGTQFPFAKAGKVHIPDDLDDVIDDEEDDDWKNWGKKKSSPDQFDLNPSDLDNMEPSQIQAELMKRQSGPVYGFVKLRFGVQRTKDSVAETAMRWSQILQTGGLEVRFMGMDLSTIMFTSETAKYIDEVKDYILEQQDAYEVKIGDSIYRRPGDPPLEEVLQTLRKENEATDEHKERAKEDL*

Click here to download the sequence:
Link to NCBI Protein BLAST