Transcript Information: S_Transcript_360760.p1


Annotated TAIR IDAT2G46000.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18921194-18922047 | Reverse length=208
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92566960818019
Replicate 21.3429524078487
Replicate 30.4811148543548
Condition 2: 8 Hour
Replicate 10.55631453001217
Replicate 21.3617646998094
Replicate 30.92677598282528
Condition 3: 24 Hour
Replicate 11.7095995775248
Replicate 20.9853831120151
Replicate 31.0966106263094


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_360760.p1 GENE.S_Transcript_360760~~S_Transcript_360760.p1 ORF type:5prime_partial len:115 (-),score=18.27 S_Transcript_360760:519-863(-)
GACGATGAATGGAAAAACTGGGGAAAGGAAAAATCCACCCGTGATCAATTCGACCTTAACCCTTCTGATTTGGACAATATGGAGCCTTCTCAGATCCAAGCTGAGTTGATGCAACGTCAATCGGGTCCAGTTTACGGGTTTGTTAAGCTCAGATTTGGCGTCCAGAGAACCAAGGATTCTGTAGCTGAAACAGCTATGAGATGGACTCAAATTCTTCAAACAGGAGGTCTGGAAGTGTGGTTCATGGGAATGGATCTTAGCACAATCATGTTCACCTCAGAGACGGCCAAATACATTGATGAGGTTTGTCCAATGTGTCTTGTAGTGTTATTCTCAGAATTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_360760.p1 GENE.S_Transcript_360760~~S_Transcript_360760.p1 ORF type:5prime_partial len:115 (-),score=18.27 S_Transcript_360760:519-863(-)
DDEWKNWGKEKSTRDQFDLNPSDLDNMEPSQIQAELMQRQSGPVYGFVKLRFGVQRTKDSVAETAMRWTQILQTGGLEVWFMGMDLSTIMFTSETAKYIDEVCPMCLVVLFSEF*

Click here to download the sequence:
Link to NCBI Protein BLAST