Transcript Information: S_Transcript_36084.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1475832154801
Replicate 21.0419797942974
Replicate 31.4011935012181
Condition 2: 8 Hour
Replicate 11.3574683774766
Replicate 21.0565760137859
Replicate 31.3130912282329
Condition 3: 24 Hour
Replicate 11.6148168494074
Replicate 21.9545792324571
Replicate 31.6573006590631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36084.p1 GENE.S_Transcript_36084~~S_Transcript_36084.p1 ORF type:complete len:487 (+),score=47.30,RVT_1|PF00078.23|1.1e-42 S_Transcript_36084:1411-2871(+)
ATGGGCCCATATAAGGCCCCCGAACCCGATGGGTTTCATGCAATTTTTTTCCAAAAGATGTGGGACGTAGTTGGGGACTCTTTATGCCGCTTTGCCCTTGAATTCTTCAATCTCAATCATCTTCCAGAGGGCTTGAACGATACTTTATTAGTTCTTATACCAAAGATCCCAAGCCCTGAACGCATGAACCAATTGCGACCCATTGCGCTGTGTAATGTTGTCTACAAAATCCTCACTAAAGTAATTGCAAACAGGATCAAATTGGTGCTCCCAAAGTTGATAGCCCCTAACCAAGCTAGCTTCGTGCCGGGCCGCCAGATTTCTGACAATATTGTTGTTACTCAAGAAGTCATTCATGCAATGAAGAAGAGAACTTCGGGAGTGGGTTGGATGGCTATCAAAATTGATCTTGAAAAAGCTTACGATCGCCTAAATTGGGACTTCATCTATGACACCCTCGTAGATCTCCCTTTTCCAGTTTCCATGATCGGTGCTATCATGTCCTGTATTACTAGCTCTCGAATGAGTGTGCTGTGGAATGGGGAAAAGACTGAGTTTTTTAAGCCCACCCGTGGAATACGACAAGGCGATCCCTTGTCCCCCTATATTTTTGTACTATGTATGGAGAGGTTGGGGCATCGTATCCAGATGGCAGTGGATGACAAGGCATGGAAACCCCATCGGATTGCTCGGAAGGCCCCTCTGTTAAGCCATTTGTTCTTCGCCGACAATCTTATCCTGTTTGCTGAGGCCACTATGAGCCAAGTTGAGGTGGTTCTAAATTGTCTTGAGGAATTCTGCATTTCCTCGAGTCAGAAGGTTAATAAAATGAAGTTGGCTATTTACTTCTCCAAAGGTGTCCCACGTGTGGAACAAGACTTGTTGAGCAAAGAACTCGGTATACCTGCCACAGACAATTTAGGTAATTATCTTGGGGTTCCTATTATTCATAATAGGGTTACTCAAAATACTTACAAATATGTACTCGAAAAAGTCAATAAAAGATTGGCAGGATGGAAAGCAAAGCAACTTAGTTTGGCTGGGCGATTCACACTGATCAAGTCGGTCACTTCAACTATACCAAATCATGTAATGCAAACAGCTCTTCTTCCTGCGACTATTTGCAAAGAGTTGGATAGGAAGAGTAGAGACTTCCTGTGGGGTGACACAGTCGACAAAAAGAAACCTCACTTGGTTAATTGGGATCAAATTTGTAGGCCAAAGAAAGTTGGAGGACTCGGCATACGTTTAGCAAGACAGGCCAATAGATCCCTTCTCTCAAAGCTAGGATGGCGCTTGCTCAAGGAACTTGACTCACTCTGGTCTCGTATTTTGAAGGCAAAATATGCTAATGGCAAGCATGGTCGGATATTCTTACAAGGCATTCTGGAGCCTCTCATCTTTGGCGTGGTCTCACAAGGTGTACCTCGACTATCAAACAAGGTTTGGGATGGAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36084.p1 GENE.S_Transcript_36084~~S_Transcript_36084.p1 ORF type:complete len:487 (+),score=47.30,RVT_1|PF00078.23|1.1e-42 S_Transcript_36084:1411-2871(+)
MGPYKAPEPDGFHAIFFQKMWDVVGDSLCRFALEFFNLNHLPEGLNDTLLVLIPKIPSPERMNQLRPIALCNVVYKILTKVIANRIKLVLPKLIAPNQASFVPGRQISDNIVVTQEVIHAMKKRTSGVGWMAIKIDLEKAYDRLNWDFIYDTLVDLPFPVSMIGAIMSCITSSRMSVLWNGEKTEFFKPTRGIRQGDPLSPYIFVLCMERLGHRIQMAVDDKAWKPHRIARKAPLLSHLFFADNLILFAEATMSQVEVVLNCLEEFCISSSQKVNKMKLAIYFSKGVPRVEQDLLSKELGIPATDNLGNYLGVPIIHNRVTQNTYKYVLEKVNKRLAGWKAKQLSLAGRFTLIKSVTSTIPNHVMQTALLPATICKELDRKSRDFLWGDTVDKKKPHLVNWDQICRPKKVGGLGIRLARQANRSLLSKLGWRLLKELDSLWSRILKAKYANGKHGRIFLQGILEPLIFGVVSQGVPRLSNKVWDGM*

Click here to download the sequence:
Link to NCBI Protein BLAST