Transcript Information: S_Transcript_361553.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38018573193115
Replicate 20.3151827079645
Replicate 30.5269353166743
Condition 2: 8 Hour
Replicate 10.3046484331019
Replicate 20
Replicate 30.30451210864259
Condition 3: 24 Hour
Replicate 10.62413952830269
Replicate 20
Replicate 30.18015746003654


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_361553.p1 GENE.S_Transcript_361553~~S_Transcript_361553.p1 ORF type:3prime_partial len:140 (+),score=14.78 S_Transcript_361553:210-626(+)
ATGTGCTACACCTGCGGCAAGCCTGGTCACAAGTCATACCAGTGTGACCATAGGGCTAACAAGAAAACTAAAGAGTATTCCAACGTAGCCGAGACTCAAGCTGAGACTGCTAAGGTGTTCGCTGCTGTGGCTACCATATACAACGTGGTTGAGGATCCGAATAGATGGATCGTAGATTATGGTGCAACAAAACACTTCTGCTCAAACTGTGACCTGTTTGCTAATTTTGAACTTTCATCGGGTAAAGAGAAGGTATACATGGGAAACAAATCAATATCGGAGATTCTTGGCAAAGGGACGGTAAATCTGAAACTGTCATCTGGTAACATTCTTAAACTGCAGAATGTTTTGTATGTCCCTTCCATGAGTAAAAACTTAATTTCTAGCTTAGCTTTAGATAGAGCTGGTATTGAAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_361553.p1 GENE.S_Transcript_361553~~S_Transcript_361553.p1 ORF type:3prime_partial len:140 (+),score=14.78 S_Transcript_361553:210-626(+)
MCYTCGKPGHKSYQCDHRANKKTKEYSNVAETQAETAKVFAAVATIYNVVEDPNRWIVDYGATKHFCSNCDLFANFELSSGKEKVYMGNKSISEILGKGTVNLKLSSGNILKLQNVLYVPSMSKNLISSLALDRAGIET

Click here to download the sequence:
Link to NCBI Protein BLAST