Transcript Information: S_Transcript_36160.p1


Annotated TAIR IDAT5G42790.1
Annotated Gene Nameproteasome alpha subunit F1
Annotated Gene Symbol(s)PAF1, ATPSM30, ARS5
Annotation TypeOrtholog
Chromosome Positionchr5:17159270-17160975 | Reverse length=278
E-Value3.5E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.786134671651
Replicate 212.941859796308
Replicate 311.539589057895
Condition 2: 8 Hour
Replicate 113.104988463043
Replicate 215.122869750877
Replicate 314.051787806636
Condition 3: 24 Hour
Replicate 19.6410379651226
Replicate 212.154893359382
Replicate 311.97694846053


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36160.p1 GENE.S_Transcript_36160~~S_Transcript_36160.p1 ORF type:internal len:179 (-),score=30.48,Proteasome|PF00227.22|1.7e-36,Proteasome_A_N|PF10584.5|2.1e-14,Proteasome_A_N|PF10584.5|7.8e+03 S_Transcript_36160:3-536(-)
CCTTTCCTCCTCTTCAAGGCTCTCCAGTCTCCACTAGCTGTTAACTTTCCGTCACTGGGAATTCAATTTCTTTCAATTTCAAGGAAGAAGATGTTCAGGAACCAGTATGACACAGACGTCACGACTTGGAGCCCAGCAGGGCGGCTATTTCAAGTAGAGTACGCCATGGAAGCTGTAAAACAAGGTTCAGCAGCAATTGGGCTCCGATCTAAAACCCATGTTGTATTGGGCTGCGTTATCAAGGCCCAATCTGAACTTTCCTCCCATCAACGCAAGATCTTCAAAGTTGATGCCCATATTGGGGTTGCTATTGCTGGTCTCACTGCTGATGGTCGTGTTCTTTCTCGTTATATGCGATCAGAATGTATCAATTATAGCTTCACTTATGAGTCCTCTCTCCCTGTTGGTCGCGTTGTTGTTCAACTTGCTGATAAGGCTCAGGTCTGCACACAGCGTTCATGGAAGCGGCCGTATGGTGTTGGCTTATTGGTAGGTGGTTTGGATGAATCTGGTGCTCATCTCTACTACAATTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36160.p1 GENE.S_Transcript_36160~~S_Transcript_36160.p1 ORF type:internal len:179 (-),score=30.48,Proteasome|PF00227.22|1.7e-36,Proteasome_A_N|PF10584.5|2.1e-14,Proteasome_A_N|PF10584.5|7.8e+03 S_Transcript_36160:3-536(-)
PFLLFKALQSPLAVNFPSLGIQFLSISRKKMFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVIKAQSELSSHQRKIFKVDAHIGVAIAGLTADGRVLSRYMRSECINYSFTYESSLPVGRVVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNC

Click here to download the sequence:
Link to NCBI Protein BLAST