Transcript Information: S_Transcript_361744.p1


Annotated TAIR IDAT5G40410.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16171385-16173211 | Forward length=608
E-Value6.5E-239
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6258746735319
Replicate 22.3055969794831
Replicate 32.4017067890219
Condition 2: 8 Hour
Replicate 14.697071500719
Replicate 25.1793347333129
Replicate 35.9972240046169
Condition 3: 24 Hour
Replicate 11.615538007343
Replicate 22.4048417428279
Replicate 33.1628930282943


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_361744.p1 GENE.S_Transcript_361744~~S_Transcript_361744.p1 ORF type:complete len:622 (+),score=114.95,PPR_2|PF13041.2|44,PPR_2|PF13041.2|7.4e-09,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|5.8e-07,PPR_2|PF13041.2|8.3,PPR_2|PF13041.2|6.6e-12,PPR_2|PF13041.2|8.3e-06,PPR_2|PF13041.2|12,PPR_2|PF13041.2|13,PPR|PF01535.16|7.3,PPR|PF01535.16|0.00045,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.0038,PPR|PF01535.16|0.019,PPR|PF01535.16|0.16,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.023,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|2.5,DYW_deaminase|PF14432.2|3.5e-39,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.0071,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.41,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.00057,PPR_1|PF12854.3|0.033,PPR_3|PF13812.2|84,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|18,PPR_3|PF13812.2|49,PPR_3|PF13812.2|8.2e+03,PPR_3|PF13812.2|8.3,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|1.6e+04 S_Transcript_361744:100-1965(+)
ATGGTAATAGCTCTTCACTCTTCACCCAACTCCTATCCTTTGCTCCCCAAAACAAGCATAATTTTCAAAAATTCAGTTCGCAATATCAAAAAATTTGTAATCTTTTTAAGCAATGTAGCTACCCTGAAGAGAACTTCCACTTCTCTTCAATCTCTACTTCATGATGTGAGCTCTTGCTCCTCCCCTTTACATTGCCAAGCAATCCACGCCATTGTGATCAAATCCCATTTCATCAATGACGGCTTCATTGGTGACCGTTTGGTGTCCCTTTATGCCAAAATTGGTCATGACAATGATGCACACAAGCTGTTTGATGAAATTCCTGACAGAGATTTGGTCTCTTGGAATTCTTTCATTTCGGCATTTTGTCGAAAGGGGAGCTTGAGTCTTTGCTGGAATTCTTTTCGTCGGATGAGGGTTGAGGCGGGTTTGGAGCCTAATGAGGTGACACTCTTATCCATGGTTTCTGCTTTTACTAATGCTGGAGCATTGGATGGTGGGAAATGCTTTCATGGGTTTGGTATGAAAATTGGATATATGGGGGAAGTTAAGGTTGTTAATGCATTGATTAATATGTATGGGAAGTTGGGTGTATTGGATGGGGCATATAACTTGTTTTGTGACATGGAAATGCCTAATTTAGTTTCATGGAACTCACTTCTTGCTATACATGCTCAAATGGGGTTAACTGATGAAGTTATACATTTTTGTAATGCAATGAGAAGGGGAGGAAATAGGCCTGATCAAGCCACTATGGTTAGCTTGCTTCAAGGGTGTACAGAATTGGGCATTGCTAAACAGGCAAGAGTTATTCATGGTTATATATTCAAGTGTGGATTCGACTCTGATATGCTTGTTGTGACGTCTCTTATGAGCTTATATTCGAAATCAGGACAGTTGAATGTTGCACTAGATGTGTTCAGAGGGTTAAACGATCCAGATAGAATAGCTTGGACAGCTATACTAGCAAGCTATGCTGTGCATGGGCATGGGAGGGAAGCGATGAAGCTTTTTGACGGCATGGTTAAGAGAGGGGTTCAACCTGATCATGTTACCTTCACTCACTTGTTAAGTGCTTGCAGCCATGCTGGTCTTGTTTCAGAAGGCAGGAAGTACTTTGAGGATATGTCCAGGGTTTTTGGGATTCATCCTCGTGTAGATCACTATTCCTGTATGGTGGATTTGTTAGGTCGTTCAGGGCTTTTGGAAGATGCATATGGGGTGATTAGGAGCATGCCAATGGAGCCAAATGCTGGTGTTTGGGGTGCTCTACTTAGTGCTTGTAGGATTCATCACAACACAGAACTAGGAAAAGAAGCAGCAGAGAAAACATTCTTGTTAGATTCTTCTGATCACAGAAACTATGTCATGCTTTCTAATATATATTCTGCTTCTGGTCAATGGAAGGATGCTTCAAAAATTCGGTCTATGATGAAGGAAAGGCGCCTAGTCAGAAACCCTGGATATAGTCTGATTGAACATGGAAACAGAGTTTATCAGTTTGTTGTGGGTGATCAGTCTCATCCTGATTCTGATAAGATCTATGCAAAGTTGGATGAAGTTCTCAGGAAGGTATGTGAAGCTGGGCTTGTGCGCCAAACAGAATTCGTTTTGCATGATGTTGAGGAGGATGTCAAGGTTGATATGATCAATAAGCACATTGAAAAGCTGGCACTTGCTTTCGGTTTGCTGGTGACTGATAATTACATGCCGATTACTATAATAAAGAACCTCAGAATCTGTGGTGATTGTCACTCCGTGATGAAGCTTGTATCTGCTATTGAGAAGCGTACTATCATCGTTCGAGATCCGAAACGGTTTCATCACTTTGTTAATGGAATTTGTTCTTGCAACGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_361744.p1 GENE.S_Transcript_361744~~S_Transcript_361744.p1 ORF type:complete len:622 (+),score=114.95,PPR_2|PF13041.2|44,PPR_2|PF13041.2|7.4e-09,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|5.8e-07,PPR_2|PF13041.2|8.3,PPR_2|PF13041.2|6.6e-12,PPR_2|PF13041.2|8.3e-06,PPR_2|PF13041.2|12,PPR_2|PF13041.2|13,PPR|PF01535.16|7.3,PPR|PF01535.16|0.00045,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.0038,PPR|PF01535.16|0.019,PPR|PF01535.16|0.16,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.023,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|2.5,DYW_deaminase|PF14432.2|3.5e-39,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.0071,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.41,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.00057,PPR_1|PF12854.3|0.033,PPR_3|PF13812.2|84,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|18,PPR_3|PF13812.2|49,PPR_3|PF13812.2|8.2e+03,PPR_3|PF13812.2|8.3,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|1.6e+04 S_Transcript_361744:100-1965(+)
MVIALHSSPNSYPLLPKTSIIFKNSVRNIKKFVIFLSNVATLKRTSTSLQSLLHDVSSCSSPLHCQAIHAIVIKSHFINDGFIGDRLVSLYAKIGHDNDAHKLFDEIPDRDLVSWNSFISAFCRKGSLSLCWNSFRRMRVEAGLEPNEVTLLSMVSAFTNAGALDGGKCFHGFGMKIGYMGEVKVVNALINMYGKLGVLDGAYNLFCDMEMPNLVSWNSLLAIHAQMGLTDEVIHFCNAMRRGGNRPDQATMVSLLQGCTELGIAKQARVIHGYIFKCGFDSDMLVVTSLMSLYSKSGQLNVALDVFRGLNDPDRIAWTAILASYAVHGHGREAMKLFDGMVKRGVQPDHVTFTHLLSACSHAGLVSEGRKYFEDMSRVFGIHPRVDHYSCMVDLLGRSGLLEDAYGVIRSMPMEPNAGVWGALLSACRIHHNTELGKEAAEKTFLLDSSDHRNYVMLSNIYSASGQWKDASKIRSMMKERRLVRNPGYSLIEHGNRVYQFVVGDQSHPDSDKIYAKLDEVLRKVCEAGLVRQTEFVLHDVEEDVKVDMINKHIEKLALAFGLLVTDNYMPITIIKNLRICGDCHSVMKLVSAIEKRTIIVRDPKRFHHFVNGICSCNDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST