Transcript Information: S_Transcript_362016.p1


Annotated TAIR IDAT2G46050.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18939262-18941034 | Forward length=590
E-Value3E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57056970488902
Replicate 20.13514725609504
Replicate 30.25418778675713
Condition 2: 8 Hour
Replicate 10.68580887696752
Replicate 20.41112126137323
Replicate 30.42435837498432
Condition 3: 24 Hour
Replicate 10.23417179852092
Replicate 20.27765772222171
Replicate 30.15449950631005


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_362016.p1 GENE.S_Transcript_362016~~S_Transcript_362016.p1 ORF type:complete len:653 (+),score=100.25,PPR|PF01535.16|0.29,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.038,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|2.6e+03,PPR|PF01535.16|0.013,PPR|PF01535.16|3.9e-08,PPR|PF01535.16|32,PPR|PF01535.16|0.0012,PPR|PF01535.16|7.3,PPR|PF01535.16|53,PPR|PF01535.16|3.5,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|0.04,PPR_2|PF13041.2|10,PPR_2|PF13041.2|7.4e-07,PPR_2|PF13041.2|5.1,PPR_2|PF13041.2|4.3e-09,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|78,PPR_2|PF13041.2|3.6,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|34,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|7.7,PPR_1|PF12854.3|1.6e+03,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|4.4e+02,PPR_3|PF13812.2|62,PPR_3|PF13812.2|25,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|12 S_Transcript_362016:299-2257(+)
ATGATTTCCAACCGCCATCTTCCTTCAATCTTAACCGTCCATTTCAAAAGTCAGTTATGTGTACCCGTATCACCATCGTACGGCTCTGATGAACAGCGAATTACGGAGCCTAACCTGCAACGGAGAACCTCAAGAATCGGATCTTTGATGCCGAATTCCGAGTCAACTCAGCACCCAAATGCCCATTTGACTCAGTTTTTTGGTTCATTGGAAGCGAAACAGCTACATTCTCATGTGATAAAGTTGGGATGTTATGATGAAGTGTATGTGCAAAATAGAATCTTGCGTGCTTATGTGAAATGTGGGGAGTTTTGGAATGTGGGCAAAGTGTTTGATGAAATGCCTGTGAGAAATATGATGTCTTGGAATACAGTGGTTAAGGCTGCAGCATTTAGTGACTGTGATGTTGTTTCGAAGGTACAAATGGGTTTTTATTATTTTAGGAGAATGTTGCTGGAAATGGTGCAACCGGATTCCACAACCATGAATGCCTTGATTTCTGCTTGTGTGGAGTTGAATGACCTTGGAATAGGTAGACATTTGCACGGTTTTGTGGTGAATTTGGGGTTGAGTGCTGATCGATTTGTTGCAAGTGCGCTTGTTGATTTGTATGGCAAGTTTGGTTTAGTTAGAGATGCTAGGTGTGCTTTTGATGAGATGGAGACAAGGGACTTGATCGCGTGGAATGTGATGGTTTCTGCTTATTCCATGAATTGCTTGGCAGAGAAAGCTTTTGGGCTTTTCAGATTAATGCAGTTAGAGGGTTTTCGAGGGGATGAGTTTACATTCGCCAGTCTTTTGAATTCGTGTAGCTTGGGTGGGTGCGGTGATTTAGGCAAGCAATTTCATGGGCTAGTTACTAAATTGTCATTTGATCTGGAGAAGCAAGTGGCTAGTGTTCTTGCTGATATGTATGCGAAAAATGGAAGTGTAATTGATGCTCGCAAAGTGTTTGATAGGATGGTTGTTCGGACCCTTGTTTCTTGGAACACTATGATTGTCGGTTATGGACAGCAAGGATATGGGAAGGAGGCTATGAAACTCTTTGTTGAAATGCTTAGGGAACATGTTGATCCAGATGAGCTAACTTTAGCCAGCATTGTTAGCTCTTGTGGCAATCTATCAGCCACCAGTGAAATAACACAAATTCATGCTTACATGCTCAAAAGTGGATTCAGCGCACATTTATCAGTGGCTAATGCTCTAATAGTTGCGTACTCCAACTGTGGCAGCCTTGCAAGTGCTTCTCAATGCTTCAATTCGGTTACAGAACCAGATTTAGTTACTTGGACCTCAATTCTCAGTGCTCATGCATTCCATGGTCAGGTCAAGGCAAGCATTGATATCTTTGAGATGATGCTGTTGTGTGGTTTGAGGCCAGATGACATTGCCTTTCTTGCGATTCTTTCAGCATGCATCCATGGAGGTCTCATAAGAGAGGGGCTTTATTATTTTAAATTAATGGTCGCTGAGTATAATATTATACCAAATTCAGAACAGTATGCATGTCTTGTTGACCTTTTAGGGCGTGGGGGTTTCATGGATGAGGCTTCCAGAATTTTAACTTCAGGACCGGTTGCTCTTGAAATAAACACACTAGGGGCTCTCGTTGGAGCTGCTAAGGCTCATGGCCATGTTCAATTAGCAGAATGGGCTGCAGGAAAGCTCTTTCAATTGGAGCCCAACAACCCTGTGAATTACACCCTAATGTACAACATGTATGCATCTGTTGGCCAGTGGCATGATGCAGCCAGAGTTCGAAAGATGATGAAGGACAGGTGTGATTCCAAAGTACCTGGCTGTAGCTGGATTGAGATTTCAGGAAAGGTCCATTCGTTTCTGTGTAGAGACACATCTCATCCTTTAGCATCAGAAGTGTATTATATGTTAGGCATATTGACAAGGCTATTGACAGAAGATGATTGTGTTACATTAGGTAATTCAAGGAGCAAATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_362016.p1 GENE.S_Transcript_362016~~S_Transcript_362016.p1 ORF type:complete len:653 (+),score=100.25,PPR|PF01535.16|0.29,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.038,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|2.6e+03,PPR|PF01535.16|0.013,PPR|PF01535.16|3.9e-08,PPR|PF01535.16|32,PPR|PF01535.16|0.0012,PPR|PF01535.16|7.3,PPR|PF01535.16|53,PPR|PF01535.16|3.5,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|0.04,PPR_2|PF13041.2|10,PPR_2|PF13041.2|7.4e-07,PPR_2|PF13041.2|5.1,PPR_2|PF13041.2|4.3e-09,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|78,PPR_2|PF13041.2|3.6,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|34,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|7.7,PPR_1|PF12854.3|1.6e+03,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|4.4e+02,PPR_3|PF13812.2|62,PPR_3|PF13812.2|25,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|12 S_Transcript_362016:299-2257(+)
MISNRHLPSILTVHFKSQLCVPVSPSYGSDEQRITEPNLQRRTSRIGSLMPNSESTQHPNAHLTQFFGSLEAKQLHSHVIKLGCYDEVYVQNRILRAYVKCGEFWNVGKVFDEMPVRNMMSWNTVVKAAAFSDCDVVSKVQMGFYYFRRMLLEMVQPDSTTMNALISACVELNDLGIGRHLHGFVVNLGLSADRFVASALVDLYGKFGLVRDARCAFDEMETRDLIAWNVMVSAYSMNCLAEKAFGLFRLMQLEGFRGDEFTFASLLNSCSLGGCGDLGKQFHGLVTKLSFDLEKQVASVLADMYAKNGSVIDARKVFDRMVVRTLVSWNTMIVGYGQQGYGKEAMKLFVEMLREHVDPDELTLASIVSSCGNLSATSEITQIHAYMLKSGFSAHLSVANALIVAYSNCGSLASASQCFNSVTEPDLVTWTSILSAHAFHGQVKASIDIFEMMLLCGLRPDDIAFLAILSACIHGGLIREGLYYFKLMVAEYNIIPNSEQYACLVDLLGRGGFMDEASRILTSGPVALEINTLGALVGAAKAHGHVQLAEWAAGKLFQLEPNNPVNYTLMYNMYASVGQWHDAARVRKMMKDRCDSKVPGCSWIEISGKVHSFLCRDTSHPLASEVYYMLGILTRLLTEDDCVTLGNSRSKS*

Click here to download the sequence:
Link to NCBI Protein BLAST