Transcript Information: S_Transcript_36208.p1


Annotated TAIR IDAT1G23230.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8244481-8251741 | Forward length=1615
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9703026551417
Replicate 210.19443572216
Replicate 311.400547056654
Condition 2: 8 Hour
Replicate 113.155962185694
Replicate 213.606758687595
Replicate 312.752391415418
Condition 3: 24 Hour
Replicate 113.028136360373
Replicate 210.584902048406
Replicate 312.171832374608


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36208.p1 GENE.S_Transcript_36208~~S_Transcript_36208.p1 ORF type:complete len:1608 (+),score=282.63,Med23|PF11573.4|5.1e-27,Med23|PF11573.4|13,Med23|PF11573.4|2.7 S_Transcript_36208:147-4970(+)
ATGGAGCAAAATCAAAATCCAAGACCTTCTTCTTCTTCTTCAAGACCTTACCAATTGCACCCTGCTAAACCCGTCATCACCGATCTCTTCAACCTTTACTTAGGGAGAACTGCCCGCCAAAAGCCTGAAGAACCGACACGGGAGCCGCCGAATAAGGCACAAAAGCGTGTAACCGCTCTTAACAGAGACCTTCCTCCTCCAAATGAGCAATTCATTTCAGATTTTGAACAAATCCAGAGGCAATTTCCTGACCAAGAGGAGCTGCGCTCCGTGACAGAATCTGTGCTAATTTCTCTAGTTGTGCAATGCAGTGGTCATTCACCTCGAGCAGAGTTTCTTCTGTTTGCTTTGAGAAGTTTGTTTAGTATAGGTTGTATAACATGGGATACTTTTTTGCCGTCGCTTCTCAGTGCAGTATCCGCTGCAGAGATGTCGCTTGGTCAAGGAAGTCAAGCTCCACCTGCTTCCACTTCGTCAAATTCAGCACAAGCTGGAATGTTGGCATCAACTAACATCTTACCTGTTTCTTCTAATCTTCAGTCTAATCCTGCATCCCCGTTAACCTCAGCTCAGGGCATAGGATCGCCTGCTCAGTCTGCCAACGAACCATCATCGGCAATAACTTTATCTCCAGTAAAATTGAATGAGATCTCTAGTAGCTTCCAGCAATCTGCATTGAAGGTTAATTCAGTAATAAGGGATAGTACAATAAGCAGTCTGCGACAGCTATGCTGTAAAATCATTCTAACTGGTCTTGAATCTAGCTTGAAGCCTGTGACACATGCTGAAATCTTATACCACATGCTAAATTGGTTGGTCAATTGGGATCAAAGACATCAAGATAATGATGAATCTGATGTTGCAAGGTGTTGGCGACCTGACAAGATTGTGACTGAATGGCTACATAGTTGTTTGGATGTTGTTTGGTTGTTGGTTGATGAGCGCAAATGCCGGGTACCATTTTATGAATTATTGCGTAGTGGACTGCAGTTCATAGAAAACATACCAGATGATGAATCTTTGTTTACGCTTATGATGGAGATTCATAGGCGCCGAGACATGATGGCTATGCATATGCAAATGTTAGATCAACACCTCCACTGTCCTACCTTTGGCACACAAAGGTTTTTACCTCTGGCAACTCCTCATTTTGGGGGTGAAACAATAACGAATTTGCGTTATTCACCAATCACATATCCAAGTGTTCTAGGGGAGCCATTACATGGAGAGGACCTAGCAGCTTGTATCCAGAAAGGGACACTCGACTGGGATAGAGCTTTGCGCTGTATCAGACATGCACTACGCACTACTCCTTCTCCGGATTGGTGGAAGCGTGTGCTTCTTGTGGCACCTTGTTACAGGCCACAACCTAATGTATCAACTCCGGGGGCTGTTTTTACGTGTGAAATGATTTGTGAGGCCACCATCGATAGAATTGTGGAACTCTTGAAGTTGACAAATTCAGACTCAAATTGCTGGCAAGAATGGCTTATCTTTTCAGATATATTCTTCTTTCTGATGAAAAGCGGTTGCATTGACTTTGTTGATTTTGTGAACAAGCTTGTCTCACGTCTCATAGAAGATGATCACCATATTTTGCGAACAAACCATGTTACCTGGTTGCTTGCGCAGATTATCCGTGTTGAACTTGTTATGAATGCTTTGAATAATGACTCCAGAAAGGTGGAAACAACAAGAAAGATCTTGTCATTCCATAGGGAAGATAAGAGTTCTGATCCCAACAGCCCCCAGAGTATTCTGCTTGACTTTATAAGTAGTTGCCAGAACCTGCGGATCTGGTCTTTAAACACATTAACTAGGGAGTATTTAAATAACGAGCAGCTTCAAAAAGGAAAGCAGATAGATGAGTGGTGGAGGCAAGTAAGCAAAGGTGAACGAATGCTGGATTACATGAATATGGATGACAGATCAGTAGGAATGCTTTGGGTGGTTTCATACACTATGGCACAGCCTGCTTGTGAAATGGCGATGAATTGGCTTAGTTCTGCTGGTACAGAAGTGTTACCAGTCTCTGGTTTACAGCCTAATGAGCGACTGATAGTGATGCGTGAGACTAGTCCATTGCCTATGTCACTACTATCTGGATTCTCAATTAACCTGTGCTTGAAACTTGCTTATCAAATGGAGGATTCTTTGTTCTCTGGACAGGTTATTCCCAGCATTGCAATGGTTGAAACTTATACAAGGTTGCTTCTAATCGCGCCTCATTCATTGTTTCGTTCACATTTCAGTCACCTGACTCAAAGGAATCCAAGCACATTAAGTAAGCCAGTTGCAACTCTTTTGGTGCTCGAGATTCTGAACTATCGGCTGCTTCCACTCTATCGGTATGAAGGAAAGAATAAAAGCTTAATGTATGATGTGACCAAGATTGTTGCTGCCTTGAAGGGGAAACGCGGTGATCATCGTGTGTTCAGATTGGCTGAAAACCTATGCATGAATCTTATCCTCTCTCTAAGAGATTTCTTTTCTGTGAAGAAAGAGGGAAAGGGACCAACTGAGTTCACAGAAACACTGAATCGGATAGCTATTATTTCTCTTGCTATTATAATTAAGACTCGTGGAATTGCTGAGGCTGAGCACCTGCTTTATCTTCCGGCAATGATGGAACAGATATTGTCAAGTAGTCAACATACTTGGTCAGAGAAAACTTTACGTTATTTTCCCACTGTACTGCGTGGCGCATTGGCTGATCGTGTAGATAAAAGGGGGCTAGCCATTCAAACTTGGCAGCAGGCAGAGACAACTGTTATCAACCAGTGCACTCAGCTTCTTTCCCCATCAGCTGATCCTTCTTATGTGGTTACATACATCCGTCATAGCTTTCCTGAACATCGACAATATCTTTGCGCTGGTGCCTGGATACTAATGCATGGACACCCTGAAAATATAAATAGCTCAAACCTGGCACGTGTTTTGAGAGAATTTTCTCCTGAAGAAGTGACTGCAAATATTTACACCATGGTTGATGTTCTGCTTCATCACATTCATGTAGAACTCCAACGTGGACATTCCTTGCAGGACCTTCTTATGAAAGCTTCTGCCAATTTGGCATTCTTTATTTGGACACATGAGCTGCTTCCTTTGGATATCTTAATTCTTGCACTGATCGACCGTGATGATGATCCACATGCTTTACACATTGCAATAAGTCTGCTTGACCGGCAAGAGCTTCAGCAAAGAATGAAATTGTTCTTTCTGACTCGTGGTCCTCCTGAACATTGGCTATATTCTGGAATGTTCAAACGTGTAGATCTACAGAAGGCTTTAGGGAGTCATCTCTCTTGGAAGGATAGATTTCCTGTTTTTTTTGATGATATTGCGGCCCGTTTGCTGCCTGTCATCCCTTTGGTAGTTTATCGGCTTATTGAAAATGATGCTATAGACCATGCTGAGAGAGTTCTGGTGATGTATAAACAATTACTAGCCTACCATCCGTTGAGGTTTACTTTCGTCCGTGACATTCTAGCATATTTCTATGGCCATCTTCAAGGAAAGCTAATTGTCCGCATCTTATATGTGCTTGACATTTCCAAGATACCATTTTCAGAATCATTTCCACAGCACATTGCCCCATCAAATTCTGCAACATGCCCTCCTCCAGATTATTTCGCTTCCCTGCTTTTTGGCCTTGTCAATAATGTTATTCCTCCGTTAACTAGCAGCTCAAAATCCGGATCAATTCTAGATGCTTCATACATTTCTGCTCGCTGTCCACCAAACAAAACAACTGTTATAGGGCAGTCTGGAGCAGCAAATGTTTCTGAGGTTCAGAAGGCTTTCTATCAAGTCCAAGATCCTGGTACATACACACAGCTGGTGCTGGAAACTGCTGTAATAGAATTGCTCTCTCTTCCTGTTTTGGCTGCCGAAATTGTGACATCACTTGTCCAAATTGTTGTTCATATACAACCTACTCTGATTCAGTCCAGCAATGGCCTGCATGGAGGTTCAAATGGATCCGGACAAACCTCTGTTTTGCCAACTTCTCCTTCTGGTGGAAGCACAGATTCTATGAATGCAAGCAGATCTGCGCCACCTGTTTCTGGATTAAATACCTCCAATTTTGTATCCCGGAGTCGTTATTCATGTCAACAGTTGTCGTGCTTGTTAATTCAAGCTTGTGGTGTTTTACTGGCTCAGCTTCCACAAGATTTCCACCTGCAATTCTATCTTGAGGTGTCTCGTTTAATTAAAGAGAGCTGGTGGCTTACTGATGGGAAGAAAACTCCTAGTGAGCAAGACTCGGCAGTTAATTATGCTCTCTTGGATCCAACATGGGCTGCTCAAGACAATACCTCTTCAGCCATAGGTAATGTTGTTGGCTTGCTTCATTCATTCTTTAGTAACCTTCCACAAGAATGGCTAGAAGGGGCCCATGTAATCGTTAAACAACTTAAACCAATAACTTCAGTTGCTATGTTGAGAATAGTTTTCCGTGTAATGGGTCCGCTGCTTCCAAGACTTGCCAATTCCCACACGCTGTTCAGCAAGACTCTCTCTGTGCTACTTGGTGCAATGATGGATGTCTTTGGGAAGAATTCACAACCTTTGGTTCCTGCTCAGGCATCAGAGATAATTGACCTGATTGACTTCCTCCATCACATTATTCACTACGAAGGGCAAGGAGGGCCAGTACAGCCTTCAAGTACACCTAATCCAGATGTTTTGGCACTGTTTGGTAAAGCATTGGAAGGTTTCCAACCTGATGTTCAGCATCTTCTTTCTCATTTGAAAACAGATGTGAATTCTTCTATATATGCATCTACACACCCAAAGCTTGCTCAGAATCCCATGTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36208.p1 GENE.S_Transcript_36208~~S_Transcript_36208.p1 ORF type:complete len:1608 (+),score=282.63,Med23|PF11573.4|5.1e-27,Med23|PF11573.4|13,Med23|PF11573.4|2.7 S_Transcript_36208:147-4970(+)
MEQNQNPRPSSSSSRPYQLHPAKPVITDLFNLYLGRTARQKPEEPTREPPNKAQKRVTALNRDLPPPNEQFISDFEQIQRQFPDQEELRSVTESVLISLVVQCSGHSPRAEFLLFALRSLFSIGCITWDTFLPSLLSAVSAAEMSLGQGSQAPPASTSSNSAQAGMLASTNILPVSSNLQSNPASPLTSAQGIGSPAQSANEPSSAITLSPVKLNEISSSFQQSALKVNSVIRDSTISSLRQLCCKIILTGLESSLKPVTHAEILYHMLNWLVNWDQRHQDNDESDVARCWRPDKIVTEWLHSCLDVVWLLVDERKCRVPFYELLRSGLQFIENIPDDESLFTLMMEIHRRRDMMAMHMQMLDQHLHCPTFGTQRFLPLATPHFGGETITNLRYSPITYPSVLGEPLHGEDLAACIQKGTLDWDRALRCIRHALRTTPSPDWWKRVLLVAPCYRPQPNVSTPGAVFTCEMICEATIDRIVELLKLTNSDSNCWQEWLIFSDIFFFLMKSGCIDFVDFVNKLVSRLIEDDHHILRTNHVTWLLAQIIRVELVMNALNNDSRKVETTRKILSFHREDKSSDPNSPQSILLDFISSCQNLRIWSLNTLTREYLNNEQLQKGKQIDEWWRQVSKGERMLDYMNMDDRSVGMLWVVSYTMAQPACEMAMNWLSSAGTEVLPVSGLQPNERLIVMRETSPLPMSLLSGFSINLCLKLAYQMEDSLFSGQVIPSIAMVETYTRLLLIAPHSLFRSHFSHLTQRNPSTLSKPVATLLVLEILNYRLLPLYRYEGKNKSLMYDVTKIVAALKGKRGDHRVFRLAENLCMNLILSLRDFFSVKKEGKGPTEFTETLNRIAIISLAIIIKTRGIAEAEHLLYLPAMMEQILSSSQHTWSEKTLRYFPTVLRGALADRVDKRGLAIQTWQQAETTVINQCTQLLSPSADPSYVVTYIRHSFPEHRQYLCAGAWILMHGHPENINSSNLARVLREFSPEEVTANIYTMVDVLLHHIHVELQRGHSLQDLLMKASANLAFFIWTHELLPLDILILALIDRDDDPHALHIAISLLDRQELQQRMKLFFLTRGPPEHWLYSGMFKRVDLQKALGSHLSWKDRFPVFFDDIAARLLPVIPLVVYRLIENDAIDHAERVLVMYKQLLAYHPLRFTFVRDILAYFYGHLQGKLIVRILYVLDISKIPFSESFPQHIAPSNSATCPPPDYFASLLFGLVNNVIPPLTSSSKSGSILDASYISARCPPNKTTVIGQSGAANVSEVQKAFYQVQDPGTYTQLVLETAVIELLSLPVLAAEIVTSLVQIVVHIQPTLIQSSNGLHGGSNGSGQTSVLPTSPSGGSTDSMNASRSAPPVSGLNTSNFVSRSRYSCQQLSCLLIQACGVLLAQLPQDFHLQFYLEVSRLIKESWWLTDGKKTPSEQDSAVNYALLDPTWAAQDNTSSAIGNVVGLLHSFFSNLPQEWLEGAHVIVKQLKPITSVAMLRIVFRVMGPLLPRLANSHTLFSKTLSVLLGAMMDVFGKNSQPLVPAQASEIIDLIDFLHHIIHYEGQGGPVQPSSTPNPDVLALFGKALEGFQPDVQHLLSHLKTDVNSSIYASTHPKLAQNPMS*

Click here to download the sequence:
Link to NCBI Protein BLAST