Transcript Information: S_Transcript_36232.p1


Annotated TAIR IDAT1G53440.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19945959-19951562 | Forward length=1035
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.597145930225
Replicate 215.546619042427
Replicate 315.412732909372
Condition 2: 8 Hour
Replicate 123.856894390867
Replicate 223.604106209626
Replicate 322.793584428499
Condition 3: 24 Hour
Replicate 115.766487609546
Replicate 215.518146387983
Replicate 315.952404153663


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36232.p1 GENE.S_Transcript_36232~~S_Transcript_36232.p1 ORF type:5prime_partial len:1053 (+),score=170.81,Pkinase|PF00069.21|4.7e-52,Pkinase_Tyr|PF07714.13|2.9e+03,Pkinase_Tyr|PF07714.13|2.1e-49,Malectin|PF11721.4|1.6e-46,Malectin|PF11721.4|3.6e+03,LRR_8|PF13855.2|0.001,LRR_8|PF13855.2|5.9e-11,LRR_8|PF13855.2|1.5e+02,LRR_8|PF13855.2|5.3e-10,LRR_1|PF00560.29|30,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|7.1,LRR_1|PF00560.29|5.4e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|12,LRR_1|PF00560.29|1.9,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|5.2e+02,LRR_4|PF12799.3|0.39,LRR_4|PF12799.3|0.65,LRR_4|PF12799.3|0.00037,LRR_4|PF12799.3|0.0068,LRR_4|PF12799.3|11,LRR_4|PF12799.3|47,LRR_4|PF12799.3|0.48,LRR_4|PF12799.3|0.03,LRR_4|PF12799.3|1.5e+04 S_Transcript_36232:1-3159(+)
CGGGATGATAAAATTTCTCTTCACAAAAACAATACTACTATTCAGAAAGAAGAAGAGGGCAAGATTCTTATAAAACAAATAAAAAATACAAACGAAGAGAGCAAGACAATCATGGTGTCGCACTACAGAGGAGTTTCTCATCCCGTGATCCTGTTGGCAATTTTTGTTAGCTATTGTTTCTCTGAATTCGGAACTCCTGCTCACCTCATCCCTGAAACCGAAGTCAATTCTCTGCAAATAATTGCCGACAAATTGAAGATCAATGCATGGAAGAATATCAACCAAACATCTTGCATTCATAAAGATCGAAGCTTCAATCAACAATACTCTCCAGGAAGTTTCAGCAATGTTACCTGTGATTGTTCCTTCAGCCAAGGCACTATTTGCCATGTCACAAATATCCAGTTGAAGAGGCTTAATCTAACTGGAAATATTCCTGAAGAATTTGGACATCTTAGTCAACTGCAAGAAATTGATCTCTCCGGAAACTATTTGAATGGAGCAATCCCTAAAAGTTTGTCAAAGATCCCGCTTGTCAATTTGGCACTTTTCACCAATCAGATCTCAGGTCCAATTCCTGATGAAATTGGACAGATTACTACCCTTGAGAAGCTGGACTTGGTAGATAACCAAATTTCAGGAGTAATTCCAACAAGTATGGGCAGTTTGAGTAGTTTGAAAATATTGGTGCTTTCTGGAAACAACATTACTGGAACAATACCTGAAAAATTTGCCAATCTAAAGAACCTCACGGAACTGAGGATGAATGGAATCAACCTTTCTGGGAAGATACCTAACTTTATTGGCAATTGGACCAAGCTTAGTATATTGGAAATGCAAGGCACATCTATGGAGGGACCTATTCCATCTAGCTTATCTCTATTGACAAGCTTGAAAACTCTGAGAATATCAGATCTCAATACGACAAGTATCAATTTCCCCAACATTTCGAGCATGAATGAACTAAAGTATTTGGTGCTGAGGAATTGCTTCATTACTGATCAGATCCCTGAATATATCAAAACCTTAGAGAGTTTAAAGCTTATAGACCTAAGCTACAATCAGTTGAGCGGTCCTATTCCAGATTCAATAGGATCCTTGCACGATCTTGAATATTTGTTCCTGTCAAACAACTTACTTTCTGGTGCGTTGCCAGGTTGGATACCGGCAGGCACACATCACTTTGATGTGTCCTATAACAACTTTTCTGGATCAATACCTGTTAGTTGCCAGCAGCAGTCGACAAATTTGAACCTTGTTGCTAGTTATTCATCTGGAGATCAGAGTAAACCAGAGACACAATGGTGCTCTGTGAAAGACCTTCCTTGCCCAAGTCCCCAGTATGATTCCTTGTTTATCAACTGTGGGGGAGGAAAGCTAAGTTTTCAGGGGAATAACTATGAAGAGGATAGCTCTGATGGAGGGCCTTCGAGCTACTTTGCAAATGAACAAAGGTGGGCTTACACTAGTACAGGAATTTTCATGTACAACGAAGATGGTAAATTTCTGGCAGAAGACAATACCACCACTGTTACCGGAATTTACATAACAGCTCGTCTGTCACCTTTATCTCTTAAGTACTATGGTCTTTGCCTGCTACAAGGCAACTACACGGTGAGGCTGCACTTTGCTGAGATTATGTTTTCCGAACCAACTGTTGGCAGGCGAATCTTCGATGTGGCAATTCAGGGGAATGTGGTCTTGAAGGATTTCAATATTGCACAAGAAGCACAAGGCATTAGAAGCCCAATCATTAAGGAGTTTAACAATGTCACTGTTAATGACAACAAGCTTGAAATCTCTTTATACTGGGCTGGAAAAGGAACCGCGTCTGTATATGACAAAAACGCATATGGGCCTCTGATATCTGCGATTGCAGTGACACCAAACTCTATTAAAAAGGGCAAGGGATGGCCAGTTGGAGCTATTGCTGGGATGGTGCTTGCTTCATGTGTTGCTACTGTATTTGTGGTGGTCATATTAATAAGAATGACAGGTAGCTTACGTGGACAGAACCGTGGTGAAGAATTTCGAGGGCTGAATACAGGTTATTTCACCTTGCGGCAAATTAAAGCTGCCACAAACAACTTTGACATACAAAACAAAATAGGTGAAGGGGGATTTGGGCCTGTTTACAAGGGCGTACTATCCGATGGTAATGTTGTTGCTGTCAAGCAGCTCTCCTCCATGTCGAAGCAAGGGAATCGTGAATTTATAAATGAGATAGGCCTGATATCCGCTTTACAACACCCAAATCTTGTAAAGCTTCATGGATGCTGCATTGAAGGGAAAGAATTGTTGCTTGTTTATGAGTACATGGAAAACAATTCCCTTGCCCATGTACTCTCTGAGAAAAAGATGATGTTGGACTGGCGAATGAGAAAGAGTATATGCTTGGGGATCGCAAGGGGATTAGCCTATCTTCATGAGGAGTCGAGGCTGAAGATTGTACATAGGGACATGAAGCCAGCTAATGTGCTTCTTGATAAGGATATGACTGCTAAAATATCAGACTTTGGTTTGGCAAGGCTTGATGAAGAAGAATATACTCATATCAACACGAGAATAGCTGGAACAGTCGGATACATGGCTCCTGAATATGCAACGAGGGGTTACCTGACGGACAAAGCAGATGTATACAGCTTTGGAGTTATCATACTTGAGCTTGTAAGTGGAAAGATCAACTCAAACTCTCGGCCAAAGGAAAATTCTATTCATCTGCTTGACTTGGCCTTTTTCCTACAAGAGCAAGGAAAGCTGCTAGAACTTGTGGATCCAAGTTTAGGGTCGAACTACTCCAAGGAAGAGGCATCAAGGCTGTTGAACTTGGCACTGTTATGTACAAACACATCTCCAACTGTAAGACCGGTAATGTCGGTGGTGGTGAGCATGATTGAGGGCAAACTTTCACTCCAAGCTCCAATCGTCAATGACAATCAAAGTGGGATGAACGAGGAGTTACATCTAAAAGCGTTTCAGAGGTTATTATATGATGAAAGCCAAACTCATTTCTCAAGGAGCTCACAACAGAAAAATACATCAAGTGATGCTCCATGGACAGGTTCTTCTCTTTCAGTGCAAAGCAAGGATGAATCTACCCGAGAAAACTCACCCACAACTAGATTGCTTTCTCATCTTGTTGATGAAAAGCCAGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36232.p1 GENE.S_Transcript_36232~~S_Transcript_36232.p1 ORF type:5prime_partial len:1053 (+),score=170.81,Pkinase|PF00069.21|4.7e-52,Pkinase_Tyr|PF07714.13|2.9e+03,Pkinase_Tyr|PF07714.13|2.1e-49,Malectin|PF11721.4|1.6e-46,Malectin|PF11721.4|3.6e+03,LRR_8|PF13855.2|0.001,LRR_8|PF13855.2|5.9e-11,LRR_8|PF13855.2|1.5e+02,LRR_8|PF13855.2|5.3e-10,LRR_1|PF00560.29|30,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|7.1,LRR_1|PF00560.29|5.4e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|12,LRR_1|PF00560.29|1.9,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|5.2e+02,LRR_4|PF12799.3|0.39,LRR_4|PF12799.3|0.65,LRR_4|PF12799.3|0.00037,LRR_4|PF12799.3|0.0068,LRR_4|PF12799.3|11,LRR_4|PF12799.3|47,LRR_4|PF12799.3|0.48,LRR_4|PF12799.3|0.03,LRR_4|PF12799.3|1.5e+04 S_Transcript_36232:1-3159(+)
RDDKISLHKNNTTIQKEEEGKILIKQIKNTNEESKTIMVSHYRGVSHPVILLAIFVSYCFSEFGTPAHLIPETEVNSLQIIADKLKINAWKNINQTSCIHKDRSFNQQYSPGSFSNVTCDCSFSQGTICHVTNIQLKRLNLTGNIPEEFGHLSQLQEIDLSGNYLNGAIPKSLSKIPLVNLALFTNQISGPIPDEIGQITTLEKLDLVDNQISGVIPTSMGSLSSLKILVLSGNNITGTIPEKFANLKNLTELRMNGINLSGKIPNFIGNWTKLSILEMQGTSMEGPIPSSLSLLTSLKTLRISDLNTTSINFPNISSMNELKYLVLRNCFITDQIPEYIKTLESLKLIDLSYNQLSGPIPDSIGSLHDLEYLFLSNNLLSGALPGWIPAGTHHFDVSYNNFSGSIPVSCQQQSTNLNLVASYSSGDQSKPETQWCSVKDLPCPSPQYDSLFINCGGGKLSFQGNNYEEDSSDGGPSSYFANEQRWAYTSTGIFMYNEDGKFLAEDNTTTVTGIYITARLSPLSLKYYGLCLLQGNYTVRLHFAEIMFSEPTVGRRIFDVAIQGNVVLKDFNIAQEAQGIRSPIIKEFNNVTVNDNKLEISLYWAGKGTASVYDKNAYGPLISAIAVTPNSIKKGKGWPVGAIAGMVLASCVATVFVVVILIRMTGSLRGQNRGEEFRGLNTGYFTLRQIKAATNNFDIQNKIGEGGFGPVYKGVLSDGNVVAVKQLSSMSKQGNREFINEIGLISALQHPNLVKLHGCCIEGKELLLVYEYMENNSLAHVLSEKKMMLDWRMRKSICLGIARGLAYLHEESRLKIVHRDMKPANVLLDKDMTAKISDFGLARLDEEEYTHINTRIAGTVGYMAPEYATRGYLTDKADVYSFGVIILELVSGKINSNSRPKENSIHLLDLAFFLQEQGKLLELVDPSLGSNYSKEEASRLLNLALLCTNTSPTVRPVMSVVVSMIEGKLSLQAPIVNDNQSGMNEELHLKAFQRLLYDESQTHFSRSSQQKNTSSDAPWTGSSLSVQSKDESTRENSPTTRLLSHLVDEKPE*

Click here to download the sequence:
Link to NCBI Protein BLAST