Transcript Information: S_Transcript_36250.p1


Annotated TAIR IDAT4G18240.1
Annotated Gene Namestarch synthase 4
Annotated Gene Symbol(s)ATSS4, SSIV, SS4
Annotation TypeHomolog
Chromosome Positionchr4:10082221-10087044 | Forward length=1040
E-Value6E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.689509696757
Replicate 221.366527954122
Replicate 322.698752102893
Condition 2: 8 Hour
Replicate 138.150155853333
Replicate 238.477814622962
Replicate 339.562549499581
Condition 3: 24 Hour
Replicate 126.110452456213
Replicate 225.748235637034
Replicate 324.674820562007


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36250.p1 GENE.S_Transcript_36250~~S_Transcript_36250.p1 ORF type:3prime_partial len:507 (+),score=85.09,Glyco_transf_5|PF08323.7|1.3e-54,Glyco_trans_4_4|PF13579.2|1.4e-06,Glyco_trans_4_4|PF13579.2|2.1e+03,Glycos_transf_1|PF00534.16|1.4e-05 S_Transcript_36250:337-1854(+)
ATGGGTTTTACAACCGTAGCAGTTATGAATCCATCCTCAAGCTTAGTTGACAGAAACCCGCTATATCAGAAACACCCCACAATCACAAGCTTATTCAACCAATTTTCTATCTGGAAAAGCCACTCCTTTTCCACTAGTTTCTCAGTTTCGGGCAATTCCTATCTCCCCTTTCAGGGGGGAATCAACAGAGGGGCATGTTCTGCTGGCTTGACATTAGAAAACATTACATGGCCTTCCCCTGATGATAAAATACCTTTCTGGGAAAAGATCAGTTCTTCGTCTGATGTGACTATGGAGGGTCTGGTTGAAAATGACAAGGATTCTGATTTAATGCACATAGTTCATGTTACAGCTGAAATGGCACCTGTAGCTAAAGTTGGTGGTCTTGGAGACGTGGTAACTGGACTTGCTCGTGCATGTTTGTCACGTGGTCATACTGTGGATGTTATGCTTCCTTACTATGAGTGTCTCCCTAAACAGCAGATAACTGACTTGTCTTTGATCTGCACGTATGACTCGTACCATGATGGCAAATGGGTCCCAACTAATGCATATCGTGCTGTGACTTCAGGCATTCCTGTCATCTTAATTGAACCTACCAACCATTTCTTTAAAGGCCAGAGAATATACGGAGGTTCATATGATGAGTTGGAGGCATATTTGTTTTTCAGTCGTGCCTGCCTTGAATGGATGCAGGTGACTGGTACACAACCAGATATCATTCATGTTCATGAGTGGCAAACAAGTGCCCTGCCGTTACTTTATTGGGACATGTACTGCAATCTTTCACTTAAGAAACCAAGAATAGTATTGACCATCCACAACATGGAGCATTATGGAGAGTGTCGTCAGGAGCAATTTGGCAAGTGTGGCCTTGATGCAGATGTTTATGCTACGGCTGACAAGGCAGTAGATGACAGAACTGTTGGGCACAATCCGGAGAGGTTGAGCTTACTAAAAGGGGGAATTGTATACAGCAATGCTGTTGTTACAGTTTCTCCATCCTATCTGAAGGAAACACTTGGCTCTGGTTGGCTTGCAAGTACATTAATCAAATATCGTGACAAGTACAACGGTATTTTAAATGGCATTGATATGACCTTGTGGAACCCGACAACTGATGCATTCTTGCCTGCTAAATTCAACGCACAAATACTGGATGGAAAGGCCATATGCAAACAATATGTCCAAAGAGGCCTTGGATTGCCAACAGAACCCTCTGATGCTATTACACAATCCAAAGACAGGGTACCTTTAGTTGTTTGCATCACACGATTGGTTGCTCAAAAAGGACTTCATTTGATCCGTCATGCAATTAAACGTGTTGAAGAACTAGGTGGACAGATGATTGTGCTGGGAAAAGCTTCAGTTGGTCATGTTGAAAGGGAATTCGAAGCCCTTGCATCCTTGCATAACCAAGGCCCCAGCATTCGGATTCTTCTGATTTATAGTGAAGAGCTGTCCCACATGCTCTATGCTGCAGCAGATCTGGTCCTAGTTCCTTCCATATATGAGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36250.p1 GENE.S_Transcript_36250~~S_Transcript_36250.p1 ORF type:3prime_partial len:507 (+),score=85.09,Glyco_transf_5|PF08323.7|1.3e-54,Glyco_trans_4_4|PF13579.2|1.4e-06,Glyco_trans_4_4|PF13579.2|2.1e+03,Glycos_transf_1|PF00534.16|1.4e-05 S_Transcript_36250:337-1854(+)
MGFTTVAVMNPSSSLVDRNPLYQKHPTITSLFNQFSIWKSHSFSTSFSVSGNSYLPFQGGINRGACSAGLTLENITWPSPDDKIPFWEKISSSSDVTMEGLVENDKDSDLMHIVHVTAEMAPVAKVGGLGDVVTGLARACLSRGHTVDVMLPYYECLPKQQITDLSLICTYDSYHDGKWVPTNAYRAVTSGIPVILIEPTNHFFKGQRIYGGSYDELEAYLFFSRACLEWMQVTGTQPDIIHVHEWQTSALPLLYWDMYCNLSLKKPRIVLTIHNMEHYGECRQEQFGKCGLDADVYATADKAVDDRTVGHNPERLSLLKGGIVYSNAVVTVSPSYLKETLGSGWLASTLIKYRDKYNGILNGIDMTLWNPTTDAFLPAKFNAQILDGKAICKQYVQRGLGLPTEPSDAITQSKDRVPLVVCITRLVAQKGLHLIRHAIKRVEELGGQMIVLGKASVGHVEREFEALASLHNQGPSIRILLIYSEELSHMLYAAADLVLVPSIYEP

Click here to download the sequence:
Link to NCBI Protein BLAST