Transcript Information: S_Transcript_362572.p1


Annotated TAIR IDAT2G15680.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:6831024-6831587 | Forward length=187
E-Value8.1E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6532503087951
Replicate 210.072143058865
Replicate 310.023226132392
Condition 2: 8 Hour
Replicate 15.79494302096
Replicate 28.0246848381628
Replicate 37.298360864749
Condition 3: 24 Hour
Replicate 18.4292756947401
Replicate 27.1440275621095
Replicate 36.9908927427224


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_362572.p1 GENE.S_Transcript_362572~~S_Transcript_362572.p1 ORF type:complete len:184 (+),score=25.61,EF-hand_1|PF00036.28|1.5e-07,EF-hand_1|PF00036.28|1.3e-07,EF-hand_1|PF00036.28|1.1e-06,EF-hand_1|PF00036.28|6.2e-07,EF-hand_5|PF13202.2|2.1e-06,EF-hand_5|PF13202.2|9.7e-07,EF-hand_5|PF13202.2|2.5e-07,EF-hand_5|PF13202.2|1.7e-05,EF-hand_6|PF13405.2|5.8e-08,EF-hand_6|PF13405.2|3.4e-05,EF-hand_6|PF13405.2|2.9e-07,EF-hand_6|PF13405.2|0.0071,EF-hand_8|PF13833.2|5.1e-05,EF-hand_8|PF13833.2|1.2e-05,EF-hand_8|PF13833.2|0.00039,EF-hand_8|PF13833.2|1.1e-08,EF-hand_7|PF13499.2|2.3e-12,EF-hand_7|PF13499.2|5.3e-10,SPARC_Ca_bdg|PF10591.5|8.9e-07,SPARC_Ca_bdg|PF10591.5|0.017,EF-hand_4|PF12763.3|6.3e-06,EF-hand_4|PF12763.3|0.43,EF-hand_9|PF14658.2|3.5,EF-hand_9|PF14658.2|0.0042 S_Transcript_362572:81-632(+)
ATGGCTAGTGTACGGTTCCTCGATTTCCAGTACAGCCTATCAAAGAGGAAGCTCAACACAAAGCCATCACGTCTGTTTTCCTTTAGCAACAAGCAGTACTCCAACTTGCTACCAATTTTCCAGCCAAATGCTGATGAAATGAGGCGAGTGTTCGACAAGTTCGATTCCAACAAAGATGGGAAGATTTCGCAAGATGAGTACAGGTCGATTCTCCGAGCCATGGGCAAGGCTGACAACATGGTAAGACGGATATTCAAAGTTGCTGATTTGAACAAAGATGGGTACATAGACTTCAAGGAGTTCATGACGTTGCACAACGATGGAGGGGGTGTACGGACTATGGACATAAGAAACGCTTTTCGAGCATTCGATTTGGATGAAGATGGAAAGATTAGTGCTGAGGAAGTGTACCAGGTGCTAAGAAGGCTTGGAGAGAATTGTAACCTTGATGAATGCCGTAGGATGGTGAGTGCAGTCGATATGAATGGAGATGGGTATATAAACATGGACGAGTTTATGACAATGATGACTCGTAGTATGGTTCGTTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_362572.p1 GENE.S_Transcript_362572~~S_Transcript_362572.p1 ORF type:complete len:184 (+),score=25.61,EF-hand_1|PF00036.28|1.5e-07,EF-hand_1|PF00036.28|1.3e-07,EF-hand_1|PF00036.28|1.1e-06,EF-hand_1|PF00036.28|6.2e-07,EF-hand_5|PF13202.2|2.1e-06,EF-hand_5|PF13202.2|9.7e-07,EF-hand_5|PF13202.2|2.5e-07,EF-hand_5|PF13202.2|1.7e-05,EF-hand_6|PF13405.2|5.8e-08,EF-hand_6|PF13405.2|3.4e-05,EF-hand_6|PF13405.2|2.9e-07,EF-hand_6|PF13405.2|0.0071,EF-hand_8|PF13833.2|5.1e-05,EF-hand_8|PF13833.2|1.2e-05,EF-hand_8|PF13833.2|0.00039,EF-hand_8|PF13833.2|1.1e-08,EF-hand_7|PF13499.2|2.3e-12,EF-hand_7|PF13499.2|5.3e-10,SPARC_Ca_bdg|PF10591.5|8.9e-07,SPARC_Ca_bdg|PF10591.5|0.017,EF-hand_4|PF12763.3|6.3e-06,EF-hand_4|PF12763.3|0.43,EF-hand_9|PF14658.2|3.5,EF-hand_9|PF14658.2|0.0042 S_Transcript_362572:81-632(+)
MASVRFLDFQYSLSKRKLNTKPSRLFSFSNKQYSNLLPIFQPNADEMRRVFDKFDSNKDGKISQDEYRSILRAMGKADNMVRRIFKVADLNKDGYIDFKEFMTLHNDGGGVRTMDIRNAFRAFDLDEDGKISAEEVYQVLRRLGENCNLDECRRMVSAVDMNGDGYINMDEFMTMMTRSMVRY*

Click here to download the sequence:
Link to NCBI Protein BLAST