Transcript Information: S_Transcript_362641.p2


Annotated TAIR IDAT3G54890.1
Annotated Gene Namephotosystem I light harvesting complex gene 1
Annotated Gene Symbol(s)LHCA1
Annotation TypeHomolog
Chromosome Positionchr3:20339706-20340922 | Reverse length=241
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62618826435719
Replicate 21.5573733805305
Replicate 30.43394673137884
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.50154935541133
Condition 3: 24 Hour
Replicate 10
Replicate 21.0665323094752
Replicate 30.29672993417784


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_362641.p2 GENE.S_Transcript_362641~~S_Transcript_362641.p2 ORF type:5prime_partial len:85 (+),score=3.38,Chloroa_b-bind|PF00504.17|2.3e-13 S_Transcript_362641:2-256(+)
GGCGCGTTTGACCCCATGGGCTTTGGCAAGGACGGCAGCAAGCTCGAGAACATGAAGCTGAAGGAGGTCAAGAACGGCCGCCTCGCGATGGTGGCCTTCATGGGCTTCGTCTTCCAACATGCTGCCACGGGCAAGGGCCCGCTGGCCGCGCTCGGCGAGCACTTGGCAGACCCTGCCAACAACAACTTTGCGACGAACGGCGTGTCGCTGCCACCGTCAGCGTTCCCCTTCCTGTACTCTGGCGAGATGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_362641.p2 GENE.S_Transcript_362641~~S_Transcript_362641.p2 ORF type:5prime_partial len:85 (+),score=3.38,Chloroa_b-bind|PF00504.17|2.3e-13 S_Transcript_362641:2-256(+)
GAFDPMGFGKDGSKLENMKLKEVKNGRLAMVAFMGFVFQHAATGKGPLAALGEHLADPANNNFATNGVSLPPSAFPFLYSGEMF*

Click here to download the sequence:
Link to NCBI Protein BLAST