Transcript Information: S_Transcript_36276.p3


Annotated TAIR IDAT1G01350.1
Annotated Gene NameZinc finger (CCCH-type/C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:136732-137970 | Forward length=343
E-Value4.8E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4590771764473
Replicate 24.9028421238922
Replicate 34.4136462422292
Condition 2: 8 Hour
Replicate 14.1921707461031
Replicate 23.4418228676503
Replicate 35.4656019499952
Condition 3: 24 Hour
Replicate 15.9746689888805
Replicate 24.2615714075183
Replicate 36.6827639022103


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36276.p3 GENE.S_Transcript_36276~~S_Transcript_36276.p3 ORF type:3prime_partial len:117 (+),score=37.47,zf-C3HC4_3|PF13920.2|9.8e-10,zf-RING_5|PF14634.2|2.4e-06,zf-C3HC4|PF00097.21|9.3e-06 S_Transcript_36276:433-780(+)
ATGCATGATCGAGGCGATTATAAGTCTGGATGGCAGATGGAGAAAGAATGGGAGGAAGTTGAGAAGGCAAGGAAGAGAAGTTTGGCGATGGGTGGTGGTGACAATGATGAGGATGGGGCCGAGCAAGGTGATGATGATGATGATTCCCTGTCCTTTGCTTGCTTCATTTGTAGAGAGCCGTTTGTTGATCCAGTTGTGACCAAGTGCAAGCATTACTTCTGTGAGCATTGTGCTTTGAAGCATCACGCCAGGAATAAAAAGTGCTTTGTTTGCAATCAGCCTACCCTTGGAATCTTTAGTACGGCATGGCAGAAGAGAAACGATGAAGGGTTTGTTCACATTGTTGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36276.p3 GENE.S_Transcript_36276~~S_Transcript_36276.p3 ORF type:3prime_partial len:117 (+),score=37.47,zf-C3HC4_3|PF13920.2|9.8e-10,zf-RING_5|PF14634.2|2.4e-06,zf-C3HC4|PF00097.21|9.3e-06 S_Transcript_36276:433-780(+)
MHDRGDYKSGWQMEKEWEEVEKARKRSLAMGGGDNDEDGAEQGDDDDDSLSFACFICREPFVDPVVTKCKHYFCEHCALKHHARNKKCFVCNQPTLGIFSTAWQKRNDEGFVHIVA

Click here to download the sequence:
Link to NCBI Protein BLAST