Transcript Information: S_Transcript_362960.p4


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3608921086172
Replicate 20.87749731194661
Replicate 30.62872963921366
Condition 2: 8 Hour
Replicate 11.1510864091634
Replicate 21.1440149872587
Replicate 31.1505713195871
Condition 3: 24 Hour
Replicate 11.2411865619656
Replicate 21.4164882235217
Replicate 32.1496060572542


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_362960.p4 GENE.S_Transcript_362960~~S_Transcript_362960.p4 ORF type:complete len:352 (+),score=55.65,RVT_1|PF00078.23|1.5e-28 S_Transcript_362960:3030-4085(+)
ATGCTCGCTAATAGATTGAAGGGACTACTCCCTGATATTATCACCGAAAACCAAAGCGCGTTCATTCCTGGAAGGCTTATTACAGACAATGCCCTTATAGCTTTTGAGGTGTTCCATGCAATGAAGAACAAAAGAAATGGCAGGAAAGGAGCTTTTGGTCTCAAACTGGACATGAGCAAGGCTTATGACCGAGTTGAGTGGAATTTTCTTGAAGGTGTCATGCTGAAGCTTGGCTTTTGTAATGGCTGGGTTCGGAAAATTATGCAATGCCTTAATTCAGTGTCTTTCTCCTTCCTCATCAACGGACAACAACGAGGCAAAATTATTCCCTCGAGGGGGCTTCGCCAAGGTGACCCGATTTCCCCCTATCTCTTTATTATTTGTGCTGACGCACTTTCTCTTATGCTGTCTAAAGCAGTTAGCAGGGGGGAGCTCCATGGTTTCAAGGTGTGTAGAGGGGCACCACCTGTGTCCCATCTCTTCTTCGCCGACGATAGCATCTTCTTTGCTCGTGCTACCCTTCAAGAATGTAACCTGATAGCTGACATCATTGGCAAGTATGAACGAGCTTCAAGCCAAAAAGTGAATTTCGACAAATCTGAAGTTTCATTTAGTGCTAATGTCCCTGCAGATCACAAAGCAAATATTACCTTGGCACTGGGCGTCAAAGAGGTGGCTAGGCATGACAAGTATCTCGGGCTCCCCACTGTTATCAGAAGATCGAAGAAAGCCATCTTTGGTGGAGTGAAGGAGAGAATCTGGAAAAAACTTTTGGGGTGGAAAGAAAAACTCCTCTCGAAGCCTGGAAAGGAAGTACTTCTCAAAGCAGTGGCACAGACCATTCCCACTTACATTATGAGCATTTTTAAGCTCCCTGACGGTTTATGTGATGAGATTAATGCTCTTATGGCTAGGTTCTGGTGGGGTGGTTCCGAGGATCGAAGGAAGATTCATTGGAAGAGCTGGGACATGTTATGCATGCCGAAGTGCAAGGGGGGTCTCGGATTCCGAGACTTAAAAATCTTCAACCAAGCACTCCTCGCCAAGCAGGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_362960.p4 GENE.S_Transcript_362960~~S_Transcript_362960.p4 ORF type:complete len:352 (+),score=55.65,RVT_1|PF00078.23|1.5e-28 S_Transcript_362960:3030-4085(+)
MLANRLKGLLPDIITENQSAFIPGRLITDNALIAFEVFHAMKNKRNGRKGAFGLKLDMSKAYDRVEWNFLEGVMLKLGFCNGWVRKIMQCLNSVSFSFLINGQQRGKIIPSRGLRQGDPISPYLFIICADALSLMLSKAVSRGELHGFKVCRGAPPVSHLFFADDSIFFARATLQECNLIADIIGKYERASSQKVNFDKSEVSFSANVPADHKANITLALGVKEVARHDKYLGLPTVIRRSKKAIFGGVKERIWKKLLGWKEKLLSKPGKEVLLKAVAQTIPTYIMSIFKLPDGLCDEINALMARFWWGGSEDRRKIHWKSWDMLCMPKCKGGLGFRDLKIFNQALLAKQG*

Click here to download the sequence:
Link to NCBI Protein BLAST