Transcript Information: S_Transcript_363107.p1


Annotated TAIR IDAT1G72220.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27184388-27185629 | Reverse length=413
E-Value8.1E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28013685510716
Replicate 20.2322398900791
Replicate 30.29120109605685
Condition 2: 8 Hour
Replicate 10.28059724101491
Replicate 20.29436642947009
Replicate 30.22437734321033
Condition 3: 24 Hour
Replicate 10.22994614200625
Replicate 20.35784965646864
Replicate 30.33186900533047


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_363107.p1 GENE.S_Transcript_363107~~S_Transcript_363107.p1 ORF type:complete len:380 (+),score=38.63,zf-RING_2|PF13639.2|3.3e+03,zf-RING_2|PF13639.2|1.9e-14,zf-RING_11|PF17123.1|2e-12,zf-rbx1|PF12678.3|3.3e-09,zf-C3HC4|PF00097.21|1e+04,zf-C3HC4|PF00097.21|3e-07,zf-C3HC4_2|PF13923.2|6.6e-06 S_Transcript_363107:176-1315(+)
ATGGCTTCTTTTCCCAGAAAACTCTTCCCTTATCTTACATCCACTACCAATGAAACAGATATCCCCTGTACTTCTGACTACTGTGACCCTTCCTGCAGTAATTTTGAAGAGTGTTATTCATTCCCGGAACCCGAATGGGTCCCACCAATTCCATCACCGCCATTGTCATCGCCACCAGCCGTCGACGTCGGTTACCAAATATCACCGGTTGTGATCGTAGTCATCCTTGTGTTAGGTGGCGCTCTTCTTCTTATTACCTACCATGCTGTTCTTGCAAGGTATTTCTCCACCTGGTGGGCCCGGCTACTTGGCCGGAACCGGACCCCACCAGATCCGAGTAATCCACCTGCGGGCCAGGTGACTGATGATCTATTCCGCGACATGGATGATCAACAAGATCCGGTGGTTGATCACCCCATTTGGTTGATCTCCACAATAGGTCTTCAACAATCAGTTATAAATGCCATCACAATGATAAGGTACAAAAGAGGGGAAGGGTTAATAGAAGGGAGTGATTGCTCAGTTTGTCTTAGTGAATTTCAAGAAGGTGAAACTCTTAGGCTATTACCCAAATGTAACCATGCATTTCATATTGATTGTATTGATACATGGCTAAGATCACATACCAACTGTCCTTTATGTCGGGCATGTATAGTGGTGAACTCTGGAAGGCCATCTTTGGCTTCGAACGAGCCGGGTTTATTGACCCGGATGGTCGATTCGGACTCGAGTGAGGTAGAATTAGGCAACAGCCAAACAGAGGATGTTGATAGATGGGTGAGGGAAAATATGGCTGAAAGTGAAACAGGGCAGTTTGAAGTTGATACTACTAATAGTGATCACAACAAGTCTCAAGATAATACCAGTAATAGTAGTAGTAGTAATGAAGGAGGTGGTCGAGTGTTAATAATACAAGAAAGAAGATCTGTTTCAATGGATTTTTCTCATGGATGCAATTCAAGAGATGTGGGGAACCTTCATTTGCAAAGAAACACCAATTCAAGATCATTTACATTAATGAGAAACTCTTCACCTTCGAGACAAGTTCTGCCTATGGCTATTAAGAGGTCATATTCATGGAGTGAAAGAGTGTTTTGGTCAACTCATAATCATCCGAGCAATTCAGATCTCTCTCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_363107.p1 GENE.S_Transcript_363107~~S_Transcript_363107.p1 ORF type:complete len:380 (+),score=38.63,zf-RING_2|PF13639.2|3.3e+03,zf-RING_2|PF13639.2|1.9e-14,zf-RING_11|PF17123.1|2e-12,zf-rbx1|PF12678.3|3.3e-09,zf-C3HC4|PF00097.21|1e+04,zf-C3HC4|PF00097.21|3e-07,zf-C3HC4_2|PF13923.2|6.6e-06 S_Transcript_363107:176-1315(+)
MASFPRKLFPYLTSTTNETDIPCTSDYCDPSCSNFEECYSFPEPEWVPPIPSPPLSSPPAVDVGYQISPVVIVVILVLGGALLLITYHAVLARYFSTWWARLLGRNRTPPDPSNPPAGQVTDDLFRDMDDQQDPVVDHPIWLISTIGLQQSVINAITMIRYKRGEGLIEGSDCSVCLSEFQEGETLRLLPKCNHAFHIDCIDTWLRSHTNCPLCRACIVVNSGRPSLASNEPGLLTRMVDSDSSEVELGNSQTEDVDRWVRENMAESETGQFEVDTTNSDHNKSQDNTSNSSSSNEGGGRVLIIQERRSVSMDFSHGCNSRDVGNLHLQRNTNSRSFTLMRNSSPSRQVLPMAIKRSYSWSERVFWSTHNHPSNSDLSP*

Click here to download the sequence:
Link to NCBI Protein BLAST