Transcript Information: S_Transcript_363183.p1


Annotated TAIR IDAT3G13170.1
Annotated Gene NameSpo11/DNA topoisomerase VI, subunit A protein
Annotated Gene Symbol(s)ATSPO11-1
Annotation TypeOrtholog
Chromosome Positionchr3:4231560-4234192 | Reverse length=362
E-Value1.8E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9570001372423
Replicate 22.5628492920345
Replicate 31.9560477664425
Condition 2: 8 Hour
Replicate 12.5848957960161
Replicate 22.9377174981459
Replicate 31.5071811437866
Condition 3: 24 Hour
Replicate 12.9788477487174
Replicate 22.4037375914308
Replicate 33.3119856289546


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_363183.p1 GENE.S_Transcript_363183~~S_Transcript_363183.p1 ORF type:5prime_partial len:198 (+),score=15.32,TP6A_N|PF04406.10|1.5e-22 S_Transcript_363183:1-594(+)
CGAGCAAAATTCAAAAAAATGGAGGGAAAGCGTTCAACTCCAAAACCAAGCGATTTGCTTCATAAAATCAAATGTTTTACGAAATCGATTATCGTTGATCTTTGCAATGGACGATCGCCTGTGGTTTCGATTAACAAATTCAGAAATTACTGCTCGGATAATTCTGGAAACTGTTTCTGCAGCCCCAGTTTGCCTGTAGGGAAAGAGATGCTCAGGTTGCAAAGTCTATCTCATGCCTATAGGATTGATGTCTTGCTAAGGGTGTTATTAATTGTTCAGAAGCTTCTACAAGAGAAACGACATGCTTCAAAAAGAGATATATACTATATGCACCCCTCTTTATTTTCTGAGCAGGCTGTTGTAGATCGGGCCATAAATGATATATGTATACTTCTAGGGTGCAGTCGTCACAACCTTAATGTGGTATCTGTTGGAAAAGGGTTGGTGATGGGCTGGATAAGATTTTTTGAAGATGAAAATAAAATTGATTGCATGGCTAGTCCTAACACAGGACAACCTATTCCTGTGTATGTTGAAGAAGTTCATAGTATCCTGGTTGCATGGACGCGAACATGGACACTGACAAGGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_363183.p1 GENE.S_Transcript_363183~~S_Transcript_363183.p1 ORF type:5prime_partial len:198 (+),score=15.32,TP6A_N|PF04406.10|1.5e-22 S_Transcript_363183:1-594(+)
RAKFKKMEGKRSTPKPSDLLHKIKCFTKSIIVDLCNGRSPVVSINKFRNYCSDNSGNCFCSPSLPVGKEMLRLQSLSHAYRIDVLLRVLLIVQKLLQEKRHASKRDIYYMHPSLFSEQAVVDRAINDICILLGCSRHNLNVVSVGKGLVMGWIRFFEDENKIDCMASPNTGQPIPVYVEEVHSILVAWTRTWTLTRT*

Click here to download the sequence:
Link to NCBI Protein BLAST