Transcript Information: S_Transcript_36343.p1


Annotated TAIR IDAT5G42765.1
Annotated Gene NameINVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17150505-17151641 | Reverse length=229
E-Value8.7E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1723773122952
Replicate 24.8612926143677
Replicate 35.9391861964137
Condition 2: 8 Hour
Replicate 17.3193076935923
Replicate 26.5409218480557
Replicate 38.8514960393567
Condition 3: 24 Hour
Replicate 16.4794145946678
Replicate 25.8580190938864
Replicate 35.1299073366338


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_36343.p1 GENE.S_Transcript_36343~~S_Transcript_36343.p1 ORF type:complete len:236 (+),score=59.87 S_Transcript_36343:110-817(+)
ATGATTACAGTGACAATGCGCTCAGCTCGTTCATCCTCTCCCTCCATTCCCATTTCTCCCAAATCCACAACTGCTGCTACTATATCTACTTGCCGTATTCCTGTTTCTTCTGGGATTTCTTGTCCTCAAAGTCGGAGACATGTTTTACTATTACCGGCTCTCATCCCTTCATTGCTCCTTCACCTTCAGCCTCAGCCTGCCTCTGCATTCAACATCGGCATCTCAGGACCGAAAGATTGGCTTAAGGACCAGAAGAAGAAGTCCATCAAGTACCTTTTAGCCCCAATTGATGCTTCTCGTGACATTCTTCAATATGCCTATCAAGTGCTTATGGCAAAGAATTCTGGACACGAGCAGAAAGATGTGGAGAAAATTCAGGGGCTACTGAGGTCAGCTGCCAGGGATTGTGTTCCCGAGGAGAGGAATTCGTTGGTCGCATTTCAAGCTAAGACTGGGGTCGAGGTTTGCACATTCAAACTGATTGTGAAGAATGCATCTTCATTACTTGATGATAGTGATAAAAAGAAGGTGGCAGCTGAAGCCATGCTGAGTGAGCTTACAAGGTCATTCGCCATTCTCATTGGTTTGGCCAAGGAAGCAAAGATTGAAATTGTGTCCGATAGAGAGAAGATTGCAGATGCTTTGATGGACGCATTATCTTCCCTTGAAAAATTTGAACAAGGGATCAAGGGATGCATTGATGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_36343.p1 GENE.S_Transcript_36343~~S_Transcript_36343.p1 ORF type:complete len:236 (+),score=59.87 S_Transcript_36343:110-817(+)
MITVTMRSARSSSPSIPISPKSTTAATISTCRIPVSSGISCPQSRRHVLLLPALIPSLLLHLQPQPASAFNIGISGPKDWLKDQKKKSIKYLLAPIDASRDILQYAYQVLMAKNSGHEQKDVEKIQGLLRSAARDCVPEERNSLVAFQAKTGVEVCTFKLIVKNASSLLDDSDKKKVAAEAMLSELTRSFAILIGLAKEAKIEIVSDREKIADALMDALSSLEKFEQGIKGCIDV*

Click here to download the sequence:
Link to NCBI Protein BLAST