Transcript Information: S_Transcript_363577.p1


Annotated TAIR IDAT3G25690.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)CHUP1
Annotation TypeOrtholog
Chromosome Positionchr3:9354061-9357757 | Forward length=1004
E-Value2.6E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.80645458288426
Replicate 20.24311613837482
Replicate 30.35564504844409
Condition 2: 8 Hour
Replicate 10.11749526345528
Replicate 20.06163043702404
Replicate 31.1744268652882
Condition 3: 24 Hour
Replicate 10
Replicate 20.24973897053826
Replicate 30.13896443198411


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_363577.p1 GENE.S_Transcript_363577~~S_Transcript_363577.p1 ORF type:complete len:363 (+),score=99.99,Hydrophob_seed|PF14547.2|3.6e-24 S_Transcript_363577:130-1218(+)
ATGGGGGGTTCAAAGCTTATAGCCATGTTGTTCATCTACATGATTTGCATGGTTATGTCATTGCCGCCTATATATGCTTGTGGTTATTGTGGCAAGCCTCACCCACCTTACGGCCGACCTTCTCCACCAACTTATCAACCACCACCCCACCATGGTGGTGGAGGACATGGAGGCATGGGCCCACCAAAACATGGAGGTGGAGGACATGGAGGCAAGGGCCCACCAGGACATGGAGGTAAACACCCACCACACCATGGTGGTGCCCCTAAAGTGTCACCACCAATTATCATGCCACCCATCATTGTTCCGGCTCCTCCGGTAATAACACCTCCTCCTGTGATAATTACTCCTCCATCTGTTCCATGTCCTCCAACTTATGGTCGACCTGGTCCACCTGGTAGTAGTGGTCCTCCAGGTACCCCTGGCACTCCTGGAGCACCGGGCACCCCAGGCGCTCCTGGGGCTCCAGGCACTCCTGGTGCTCCAGGTGGAGGTGGACCAGGAAAAGGTGGTGGAGGTGGTTATGCACCTCCTGGTAAAGGAGGCGGTGGGGGTGGGCCACCAGGAAAAGGTGGTGGAGGTGGTTATAAACCACCAGGTAGAGGAGGTGGGGGTGGTTACACACCACCTGGAAAAGGAGGCGGCGGAGGTGGTTACACACCACCAGGGAAAGGTGGTGGAGGTGGTTATACACCACCTGGAAGAGGAGGTGGTGGTGGTGGTGGACCACCAGGTAGAGGCGGTGGAGGTGGTTATCCACCACCAGGTAGAGGTGGTGGAGGGGGTGGTGCTCCAGGTATAAGTCCAGCACCTACTACCCCAGAAACATGTCCGATTGATGCACTAAAGTTGGGGCTTTGCTTGGATGTGCTAGGAGGTGCAGTGCATATTGGTATAGGAGACCCGGTAAAAAATGTGTGTTGTCCGGTGCTAGAAGGATTGCTAGCGCTTGAGGCAGCTCTATGTCTTTGCACAGCAATAAGGATTAAGCTTCTCAACTTGCCCATATACATTCCTTTGGCTCTATCAGTCCTTGCAACCTGTGGATTGACCCCTCCACCCGGTTTTACGTGTCCTCCCGTCTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_363577.p1 GENE.S_Transcript_363577~~S_Transcript_363577.p1 ORF type:complete len:363 (+),score=99.99,Hydrophob_seed|PF14547.2|3.6e-24 S_Transcript_363577:130-1218(+)
MGGSKLIAMLFIYMICMVMSLPPIYACGYCGKPHPPYGRPSPPTYQPPPHHGGGGHGGMGPPKHGGGGHGGKGPPGHGGKHPPHHGGAPKVSPPIIMPPIIVPAPPVITPPPVIITPPSVPCPPTYGRPGPPGSSGPPGTPGTPGAPGTPGAPGAPGTPGAPGGGGPGKGGGGGYAPPGKGGGGGGPPGKGGGGGYKPPGRGGGGGYTPPGKGGGGGGYTPPGKGGGGGYTPPGRGGGGGGGPPGRGGGGGYPPPGRGGGGGGAPGISPAPTTPETCPIDALKLGLCLDVLGGAVHIGIGDPVKNVCCPVLEGLLALEAALCLCTAIRIKLLNLPIYIPLALSVLATCGLTPPPGFTCPPVS*

Click here to download the sequence:
Link to NCBI Protein BLAST